Yimella sp. cx-51: J5M86_07920
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Entry
J5M86_07920 CDS
T07124
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
yim
Yimella sp. cx-51
Brite
KEGG Orthology (KO) [BR:
yim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yim03400
]
J5M86_07920
DNA repair and recombination proteins [BR:
yim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
J5M86_07920
Archaeal homologous recombinant proteins
J5M86_07920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_27
AAA_29
Methyltransf_29
VasL
AAA_15
AAA
Motif
Other DBs
NCBI-ProteinID:
QTH36873
LinkDB
All DBs
Position
1667208..1670243
Genome browser
AA seq
1011 aa
AA seq
DB search
MKLHHLQLRAFGPFGGDEQIDFDTLGASGLFLMHGPTGSGKTSVLDAICFALFASVPGGR
TGQAERLVSDHAEAGTKPMVRLEFTLAGRRLRITRTPAHLAAKKRGSGTTRRQPSVLIEE
RLAGAWHALSNRADETADLLDDLLGMGLHQFTQVVLLPQGEFAAFLRAKADDRAALLQRL
FDISRFSDLEAWLAQERRECVAAVAANDQAIQTAVVRVEESLVDHAAVIERWRAAEVTAL
PAQIAATETVVQQQLTEAMALADASAAAAEAAQTAHDHAVVVAQLQRQAGEARSVIKAWS
EQQDEADATRSALDQHDRALRVVPLHRSATRAATRLEARRSELTALETGLLADHGEDVDT
DELTRALARGRESLQLAGEAMREHRRSSTRRPGCDRDVAAAQPHRDALAHQMVDLDIRLT
MLDDTIAAAQQVIDESAHCERQRELLDEWRTAERDRIGAESVRDETATQQSDARTRFTAA
ESTVLRLRTQRLAGMAAELAAGLDDDSPCPVCGSCEHPQPATLAERVTQEAVDAAEQAAA
TSRTQLDDASARFAAAQANVIAAQKRAEQISTQWEQLGGSTLDQASSPALRLEVEAAVRA
LQQARTTTRAARTERATIEPEGDALRSRLKGAEESLTEKRAALAALDRQIAEADDTRQRA
WQTHLERCVCSASDHGVEQAISRHAALGDRLAELDRRRAAVAVLISELDEATTSLNRQVE
DEGFDCLDDALAAVIPAAQAQQMRSQLAQAEAAVERARGVLAQSDVAAADALEPIDLPSS
EARRREAMTAGRRARTALDDVRRAAHSLRRLDAEVTTLLQASAHDRDRLPALQRMADLAA
GSGDNSLRMRLSAYVLAARLEEVTALANHQLSVMSAGRYQLAHTDALARGGARSGLSLQV
RDSWTGTSRDTATLSGGETFMVSLALALGLGQAVLHDTGGRPLQTLLVDEGFGTLDDESL
ELVMHVLDELRSGGRTVGIVSHVGELRIRVPAQIQVRKTEQGSSVRVHVAA
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
gtgaagctgcaccatctgcagttgcgggctttcggacccttcggcggcgacgagcagatc
gacttcgacaccctgggagccagcgggctgttcctcatgcacggcccgaccggcagcgga
aagacgagtgtgctcgacgccatctgtttcgccctcttcgcctccgtgcccggcgggcgc
accggccaggccgaacgtctggtcagcgaccacgccgaggccggcaccaagccgatggtg
cgcctggagttcacccttgccgggcgacgcctgcgcatcacccgcactcctgcccatctt
gcagccaagaagcgcggctctggcaccacccgcaggcagccctcggtgctgatcgaggaa
cgcctcgcaggcgcctggcacgcactgagcaaccgcgctgacgagaccgccgatctgctc
gacgacctcctcggcatgggcctgcaccagttcacccaggtggtgctgctacctcagggt
gaattcgccgccttcctgcgcgcgaaggccgacgaccgtgcggcactgctgcaaagactc
ttcgacatctcccgcttcagcgatctcgaggcgtggctcgcccaggagcgccgcgaatgc
gttgccgcggtcgccgccaatgaccaggccatccagaccgccgtcgtgcgcgtcgaggag
tcgttggtcgatcacgcggcggtgatcgagcgctggcgcgcagcagaggtcaccgcgctg
cctgcgcagatcgcggcgaccgaaaccgttgtccagcagcaactgaccgaggcgatggca
ctcgccgacgcctcggccgccgccgccgaagcagcgcagaccgcccacgaccacgctgtg
gtggtggcgcagttgcaacgtcaggccggcgaagcgcgttcggtgatcaaggcgtggtcc
gaacaacaggacgaggccgacgcgacccgttccgccctcgaccagcacgaccgcgccctg
cgggtcgtgcccttgcaccggtcggcgacccgcgcggccacccggcttgaggcccgccgc
agcgaactcaccgcactcgaaaccggcttgctggccgaccacggcgaagatgtcgacacc
gacgagctgacgcgggcgcttgctcgtggtcgcgagtcattgcagctggctggcgaagcg
atgcgcgaacatcgcaggagcagcacccggcgtcccgggtgcgatcgtgacgtcgctgcc
gcacaacctcaccgcgacgcgctcgcccaccagatggtcgacctcgacatccggctgacg
atgctcgacgacaccatcgcggcggcgcagcaggtcatcgatgagtctgcgcactgcgaa
cgccaacgtgagctgctggacgaatggcgaacggccgaacgtgaccgcatcggcgccgaa
tccgtgcgggacgaaacagccacccagcagtcggacgcacgcacgaggttcaccgccgct
gagagcacggtgctgcgcctgcggacacagcgtctggcgggcatggccgccgagctggct
gctggcctcgacgacgactcaccgtgcccggtgtgcggatcatgcgagcacccacaacca
gccacccttgccgaacgcgtcacccaggaagccgtcgacgccgccgaacaagccgcggcc
acttcccgcacccaactggacgacgcctccgcccgtttcgccgctgcacaggcaaatgtg
atcgcggcgcagaaacgtgccgaacagatcagcacgcagtgggagcaattgggcggcagc
accctcgaccaagcgagcagccctgcacttcgactcgaagttgaggctgcggtgcgcgcg
ctgcagcaggcgcgaaccacaaccagagctgcccgcaccgaacgcgcgaccatcgaaccc
gagggtgatgcgctgcggagccgcctgaaaggtgccgaggagtcgctcaccgaaaagcgt
gctgccctcgccgcgctcgaccgacagatcgccgaagccgacgacacccggcagcgcgcc
tggcagacccacctggagcggtgcgtgtgcagcgccagcgaccacggcgtcgagcaagcc
atcagccgccacgccgcccttggtgatcgcctggccgagctagaccgccgtcgtgctgcg
gtcgccgtcctgatcagcgagttggacgaggccaccacgtcgttgaaccgtcaggtcgaa
gatgaaggttttgactgcctggacgacgcgctcgcagcggtcatcccggccgcacaggct
caacagatgcgcagccagttggcgcaggccgaagccgccgtcgagcgggcccgcggcgtc
ctggcccaatccgatgtcgcagcggcggatgccctcgagccgatcgatctgccgagcagc
gaggcgcgtcgccgagaggcgatgactgctgggcgtcgggcccgcaccgcgctggacgac
gtccggcgagcagcccacagcctgcgacgactcgacgccgaagtgaccactttgttgcag
gcgtccgcccacgaccgcgaccgcctccccgcgctgcagcgaatggccgacctggcggcg
ggtagcggcgacaactcgttgcgcatgcgactgtcggcctacgtgctggcggcgcgcctc
gaagaagtgacggcgctggccaaccaccagctgagcgtgatgtcggccgggcgttaccaa
ctggcccacaccgacgccctggcgcgtggcggggcccgcagcggcctgagcctgcaggtg
cgcgactcctggacgggcaccagccgcgacaccgcgacgctctccggcggcgagaccttc
atggtgtcgctggccctggcgctcggcctcggtcaagccgtgctgcacgacaccggcgga
cgtccgctgcagaccctcctggtcgacgagggcttcggcacgctcgacgacgaatccctc
gaactggtcatgcacgtgctcgacgaactgcgctcgggcggccgcacggtcggcatcgtg
agccatgtcggagagctgcgcatccgggtgcctgcacagatccaggtgcgcaagaccgag
cagggatcgtcggtgagggtacatgtcgccgcctga
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