Yimella sp. cx-51: J5M86_09790
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Entry
J5M86_09790 CDS
T07124
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
yim
Yimella sp. cx-51
Pathway
yim00550
Peptidoglycan biosynthesis
yim01100
Metabolic pathways
yim01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
yim00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
J5M86_09790 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
J5M86_09790 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
yim01011
]
J5M86_09790 (mrdA)
Enzymes [BR:
yim01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
J5M86_09790 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
yim01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
J5M86_09790 (mrdA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
QTH37195
LinkDB
All DBs
Position
complement(2057217..2059265)
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AA seq
682 aa
AA seq
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MRWRDRDSITYPRGYRPGSRSPYATRIWALLLVSVLILGTLVGRLFQLQVVDGPAMRAAA
QQINTRTIDAAATRGRILAADGTALVTNGSTSVLTVDPTVLADSPDGGRAVFTRVQQLVG
GDLEQMLARTKPCGSRGAPPPPVCNALSPVEPIPVLSNVDPGLSMTLLERPEDFPGIAVQ
QQQVRRFPAPSGVNAAQLIGYLGRTNSGDLQRDSSLRATDVVGRGGLELQYDRTLRGTPG
RTVLAVDARGLPVRTVSTQASVPGHDLITHLDVPVQRAAESALSATIGRLRAAKKPATGG
AAVVLDASSGAVVAMASNPSYDPIVWTGGISARDYTSLTSASAGNPLLNRTIGGLQPPAS
TFKVVSMPAAVANGVDPRGKYECSSSLMVGSRVFKNFESAAYGLIDLPTALEVSCDTVFY
RWAYAQWIAEGGIGADKATPSSFVEQTRAFGFGAKSGVDLPGEAAGVVPSRAWKHNRWQQ
TKAAMCRRAQNGYPEVKDKAQAAYFTQLAQENCKYGYQWQAGDAVNFSIGQGDLLVSPLQ
TAVAYASLANGGTLWQPQVVGATRSADGSSQRKISPKRAGTVQLSAATRTAITDGLRRVV
TEPSGTASSVFAGFPATYPISGKTGTAEVYGKDTTAWFASYGPKLASGKQYVVVVMIEQG
GLGGEAAAPAARLIWDVLRTRP
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgaggtggcgcgaccgcgattccatcacctatccgcgcggctaccggcccggaagccgg
tcgccctacgctacccgtatctgggcgctgctgctggtgagcgtgctgatcctcggcacc
ctggttggacgactcttccaactgcaggtggtcgacggccccgcaatgagggccgcggcc
cagcagatcaacacccgcaccatcgatgccgccgccacgcgcggtcgcatcctggctgct
gacggcaccgcgctggtcaccaacgggtcgacctcggtgctcaccgtcgacccgaccgtg
ctggccgacagcccggacggcggacgagcggtgttcacccgcgtccagcaactcgtcggc
ggtgatctggagcagatgcttgctcgcaccaaaccgtgcggcagccgcggtgcgccgccg
cctccggtctgcaatgcgctcagcccggtcgagccgatcccggtgctgagcaacgtcgat
ccagggctgtcgatgaccctgctcgagcgtccggaagatttccccggcatcgccgtccag
caacagcaggtgcgccgtttcccggctcccagcggagtgaacgcagcacaactgatcggt
tatctcgggcgcaccaactccggtgatctgcaacgggattcgtcgttgcgcgccaccgat
gtggttggccgagggggtctggagctgcagtacgaccgcacgctgcgcggcacccccgga
cgcaccgtgcttgcggtcgatgctcgcgggctcccggtgcgcacagtgtcgacgcaagcc
tccgtgccggggcacgacctgatcacccacctcgatgtgccggtgcagcgcgccgccgaa
tcggcgctttcggcgacgatcggccgcctgcgcgcggccaagaagccggccaccggtggc
gcggcggtggtgctggacgcctcctcgggcgccgtcgtggcgatggccagcaaccctagt
tacgacccgatcgtgtggacgggtgggatcagcgctcgcgattacacgtccctcaccagt
gcgtcggcgggcaacccgttgctcaacagaacgatcggcggactccagcccccggcgtcc
accttcaaggtggtcagcatgccggcggccgttgcgaacggtgtcgatccgcgcggcaag
tacgagtgctcctccagcctcatggtgggcagccgcgtcttcaagaacttcgaatcggcg
gcctacggcctgatcgacctacccacggcactcgaggtttcctgcgacaccgtcttctac
cggtgggcctacgcgcaatggatcgccgagggcggcattggcgctgacaaggcgacgccc
agttccttcgtggagcagacccgcgccttcggcttcggggcaaaaagcggtgtcgaccta
cccggtgaagccgccggtgtggtgcccagccgcgcctggaagcacaaccgttggcagcag
acgaaggccgcgatgtgccgccgggcccagaacggctatccggaggtgaaggacaaggcg
caagccgcctacttcacccagctcgcgcaggagaactgcaagtacggctaccagtggcag
gccggtgacgccgtgaacttctcgatcggtcagggcgatctgctcgtctcgccgctgcag
accgccgtcgcgtacgcgtcgctggccaacggcggcaccctctggcagccccaggtggtg
ggcgcgacccgctcggcggacggctcgtcgcagcgcaagatcagccccaagcgcgccggg
acggtgcagctgtccgcggccacccgcaccgccatcaccgacggactacggcgggtggtc
accgagcccagcggcacggcgtccagtgtcttcgccggctttccggccacctacccgatc
tccggcaaaaccggcacggcggaggtctacggcaaggacaccactgcgtggttcgcctcg
tacggtccgaaactggcgtccggcaagcagtacgtcgtcgtggtgatgatcgagcagggc
gggctcggcggagaagctgcggctcccgcggcacggctgatctgggacgtcttgcgcact
cgtccatga
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