Yimella sp. cx-51: J5M86_10510
Help
Entry
J5M86_10510 CDS
T07124
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
yim
Yimella sp. cx-51
Pathway
yim00260
Glycine, serine and threonine metabolism
yim00460
Cyanoamino acid metabolism
yim00630
Glyoxylate and dicarboxylate metabolism
yim00670
One carbon pool by folate
yim00680
Methane metabolism
yim01100
Metabolic pathways
yim01110
Biosynthesis of secondary metabolites
yim01120
Microbial metabolism in diverse environments
yim01200
Carbon metabolism
yim01230
Biosynthesis of amino acids
yim01240
Biosynthesis of cofactors
yim04981
Folate transport and metabolism
Module
yim_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
yim00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
J5M86_10510
09102 Energy metabolism
00680 Methane metabolism
J5M86_10510
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
J5M86_10510
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
J5M86_10510
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
J5M86_10510
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
J5M86_10510
Enzymes [BR:
yim01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
J5M86_10510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
QTH37311
LinkDB
All DBs
Position
complement(2204052..2205329)
Genome browser
AA seq
425 aa
AA seq
DB search
MTTPFYGADYEALEQFDPEIAGVLVDEVTRIRSGLQLIASENLSSPAVITALGSTLTNKY
AEGYPGRRYYGGCSVVDRAENLAIERAKELFGAEHANVQAHSGASANQAVYGAFMQPGDT
ILAMALPMGGHLTHGTKVSFSGKWFNAVHYGVDKETENIDYDEVERLAKEHKPKVICAGG
SAIPRLIDFEFFRKLADEVGAIFWVDAAHFIGLVAGKAIPSPVPYADVVTFTTHKVLRGP
RSGALVSKAEHAAKLDKAVFPMMQGGPQMHTIAAKAVNFKECATPEYQQYAKDVIANAQQ
LATSLGEKGIRPTTGGTDTHLSLHDLQGVGVTGADAELRADAAGIVLNKNAIPFDPQKPN
VASGIRVGTPSVTTQGMGTEEMKVIAELIHKAITEGDGNPESAISEEVRGGVEDLCKRFP
AYPQN
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgcccttctacggcgccgactacgaggcgctggagcagttcgaccccgagatc
gcgggagttctcgtcgacgaagtgacccgcatccgcagcggcctgcagttgatcgccagc
gaaaacctgtccagccccgcggtgatcaccgcgctcgggtcgacgctgaccaacaagtac
gccgagggctacccgggtcgccgctactacggcggttgctccgtggtcgaccgtgccgag
aacctcgcgatcgagcgggccaaggagctcttcggcgccgagcacgccaacgtccaggcc
cattccggagccagcgccaaccaggccgtctacggcgcattcatgcagccgggcgacacc
atcctggcgatggcgctgccgatgggtggccacctcacgcacggtacgaaggtcagcttc
tcgggcaagtggttcaacgcggtgcactacggcgtcgacaaggagaccgagaacatcgac
tacgacgaggtcgagcgcctggccaaggagcacaagccgaaggtgatctgtgccggcggc
tcggccattccgcgcctcatcgacttcgagttcttccgcaagctcgccgacgaggtcggt
gcgatcttctgggtcgacgccgctcacttcatcggcctggtggccggcaaggcgatcccg
agcccggtgccgtacgccgatgtggtcaccttcaccacgcacaaggtgctgcgcggcccg
cgttccggcgctctggtgagcaaggccgagcacgccgccaagctcgacaaggccgtcttc
ccgatgatgcagggtggcccgcagatgcacaccatcgcggccaaggccgtcaacttcaag
gagtgcgcgaccccggagtaccagcagtacgccaaggacgtcatcgccaacgcgcagcag
ctggcaacctcgttgggggagaagggcattcgcccgaccaccggcggcaccgacacccac
ctgtcgttgcacgacctgcagggcgtgggcgtcaccggcgccgatgccgaactgcgagcg
gacgccgccggcatcgtcctcaacaagaacgccatccccttcgacccgcagaagccgaat
gtggcctcgggcatccgcgtgggcaccccgtcggtgaccacccagggcatgggcacggag
gagatgaaggtcatcgccgagctcatccacaaggcgatcaccgaaggcgacggcaacccc
gagagcgccatctccgaggaagtgcgcggcggagttgaagacctctgcaagcgcttcccg
gcgtaccctcagaactga
DBGET
integrated database retrieval system