Yimella sp. cx-51: J5M86_10990
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Entry
J5M86_10990 CDS
T07124
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
yim
Yimella sp. cx-51
Pathway
yim03420
Nucleotide excision repair
yim03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
yim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
J5M86_10990
03430 Mismatch repair
J5M86_10990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yim03400
]
J5M86_10990
Enzymes [BR:
yim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J5M86_10990
DNA repair and recombination proteins [BR:
yim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J5M86_10990
MMR (mismatch excision repair)
Other MMR factors
J5M86_10990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
FAD_binding_5
PhoH
Motif
Other DBs
NCBI-ProteinID:
QTH37399
LinkDB
All DBs
Position
complement(2308268..2310391)
Genome browser
AA seq
707 aa
AA seq
DB search
MTPDEVLEGLDPEQRLVASQPIGPMCVLAGAGTGKTRAITHRIAYGAHAGAYQPQRVLAV
TFTARAAGEMRTRLRGLGLPTVQARTFHAAALKQLGFFWPKVIGGAPPEVLKHKAPAVGE
AGARLRFELDRVAIRDIASEIEWAKVGMLTPNTYATAAARAGRRVADLDHTAMARLWETY
EEVKSARHVIDFEDVLLLMAGILVERDDVARTVRDQYRHFVVDEYQDVNRVQQTLLDLWI
GDRSDVCVVGDPAQTIYSFTGASPVHLRDFAAKHQGAQTVRLVRNYRSTPQVLELANAVL
GAAKGTGYAQLHAQSKDGPAVRLLQYADDIAESEGIVEEVKSLLAQGVPASEIAVLYRIN
AQSEPIERALSEAGINYLVRGGERFFQRQEVRQAVVLLRAAARSDDGAASLGALVRDVIT
GAGWSPQRPSGGALLERWQSLEALATVADELITATPSARLPDLVHELDRRMSEQHAPTVE
GVTLASLHAAKGLEWDAVVLAGCSDGLLPLSHAEGPDAVEEERRLTYVGLTRARIHLVLT
WAQARQPGGKPTRSVSRFLHAADGILDGVAPRRAANPRATRAKKTERARVVKCRTCGKDL
YLAAERKIGRCGDCPSTYDEATFEELRTWRKALADRLRVPAFVVFTDATLIAIAEHEPAD
ERALSKISGVGVRKLATYGPSVLGVLRGESTDSMVEIACAATESDSS
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgacgcctgacgaggtgttggagggcctcgacccggagcagcgcttggtcgcttcgcaa
ccgatcgggccgatgtgcgtgctcgctggagcaggcacgggcaagacgcgcgccatcacc
catcgcatcgcctatggcgcgcacgccggcgcgtaccaaccgcagcgggtgctcgccgtc
accttcaccgctcgcgccgcaggggagatgcgcacccgtctgcggggcctcggactaccc
acggtgcaggcacgcactttccacgccgccgcgctcaagcagctgggcttcttctggccc
aaggtgattggcggcgcgcctcccgaagtgctcaagcacaaggctcccgcggtcggtgag
gccggagcgcggcttcgcttcgaactcgaccgagtggcgatcagggacatcgcctcggag
attgagtgggccaaggtcggcatgctcacccccaacacctatgcaacggcagcggcgcga
gccggacgccgcgtggccgatctggaccacactgcgatggcccgcctgtgggagacctac
gaagaggtgaagtcggcccggcacgtcatcgacttcgaggacgtcctgctgctgatggcc
ggaatcctggtggagcgtgacgacgtcgcccgcaccgtgcgcgaccagtaccgccacttc
gtggtcgatgagtaccaagacgtcaaccgcgtgcagcagaccctgctcgatctctggatc
ggcgaccgcagtgatgtctgcgtggtgggcgaccccgcccagaccatctactccttcacc
ggagcctcaccggtgcacctgcgtgatttcgccgccaagcaccaaggcgcccagacggtg
cggctggtgcgcaactatcgctcgaccccgcaggtgttggagttggcgaatgccgtgctg
ggtgccgcgaagggcacgggttatgcgcagttgcatgcccagagcaaggacggcccggcg
gtcaggctgctgcaatacgccgacgacatcgctgagtccgaaggcattgtcgaggaggtc
aaatcgcttctggcacaaggtgttccagccagcgaaatcgccgtcctgtatcgcatcaac
gcccagtcggagccgatcgagcgggcgttgtccgaagccggaatcaactacctcgtccgc
ggcggcgagcgcttcttccagcggcaggaggtgcggcaggcggtcgtgttgttgcgtgca
gcagcccgttcggacgacggtgcggcgtccctcggcgcgctggtgcgcgatgtcatcacc
ggggccggatggtcgccgcagcgaccttcgggtggagctctgctcgaacgatggcagtcg
ttggaggcgctggccacggtcgcggacgagttgatcaccgccaccccctcggcccggctg
cccgatctcgtccacgaactcgaccgacggatgtccgagcagcatgcccccaccgtcgag
ggcgtgacgcttgcttcgttgcacgcggccaagggcctggaatgggatgccgtcgtgctc
gccggttgttccgacggcctgctcccgttgtcgcatgccgaaggcccggacgcggtggag
gaggagcgccgcctgacctatgtcgggttgacgcgcgcccggatccacctggtcctcacc
tgggcccaggcgcgccaaccgggcggtaagccgacgcgttcggtctcgcgcttcctgcac
gccgccgacggcatcctcgacggcgtcgcgccgcggcgagcagccaaccctcgggcgacg
agggccaagaagaccgaacgggccagggtcgtcaagtgccgcacctgcgggaaagatctc
tacctcgccgcggagcgaaagatcggacggtgcggcgactgcccgagcacctacgacgag
gcgacgttcgaggagttgcgcacctggcgcaaggcgcttgccgaccggttgcgggtgccg
gctttcgtcgtcttcaccgacgcgacgctcatcgcgatcgccgagcacgagccggcggac
gaacgagcgttgtccaagatttccggggtcggggtgcgcaaattggccacctacgggcca
tcagtgttgggcgtcctgcgtggcgaatccactgactcgatggtcgagattgcttgtgct
gcaacggaatccgactcttcctga
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