Yimella sp. cx-51: J5M86_11425
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Entry
J5M86_11425 CDS
T07124
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
yim
Yimella sp. cx-51
Pathway
yim03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
yim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
J5M86_11425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yim03400
]
J5M86_11425
Enzymes [BR:
yim01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
J5M86_11425
DNA repair and recombination proteins [BR:
yim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
J5M86_11425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Spectrin_SYNE1
DUF7260
TraB_PrgY_gumN
Motif
Other DBs
NCBI-ProteinID:
QTH37479
LinkDB
All DBs
Position
2400526..2400783
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AA seq
85 aa
AA seq
DB search
MSDQPSKSSTKSAASDANDDIGDLGYEAARDELARIVSTLENGSATLEESMKLWERGEAL
AAHCHRWLDDAQTRVQKLTDDRDQD
NT seq
258 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaccagccctcgaagtcgtcgacgaagtcagcagccagcgatgcgaacgacgac
atcggcgacctcggctacgaagcggcccgcgacgaactcgcccggatcgtgtcgaccctt
gagaacggctcagccaccctggaggagtcgatgaagctctgggaacgcggcgaggccttg
gcggcccactgtcaccggtggctggacgacgcccagacccgcgtccagaaactcaccgac
gaccgcgatcaggactga
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