Yimella sp. cx-51: J5M86_13115
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Entry
J5M86_13115 CDS
T07124
Symbol
xdhB
Name
(GenBank) xanthine dehydrogenase molybdopterin binding subunit
KO
K13482
xanthine dehydrogenase large subunit [EC:
1.17.1.4
]
Organism
yim
Yimella sp. cx-51
Pathway
yim00230
Purine metabolism
yim01100
Metabolic pathways
yim01120
Microbial metabolism in diverse environments
yim01232
Nucleotide metabolism
Module
yim_M00958
Adenine ribonucleotide degradation, AMP => Urate
yim_M00959
Guanine ribonucleotide degradation, GMP => Urate
Brite
KEGG Orthology (KO) [BR:
yim00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
J5M86_13115 (xdhB)
Enzymes [BR:
yim01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.4 xanthine dehydrogenase
J5M86_13115 (xdhB)
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Gene cluster
GFIT
Motif
Pfam:
MoCoBD_2
MoCoBD_1
Ald_Xan_dh_C
Motif
Other DBs
NCBI-ProteinID:
QTH37774
LinkDB
All DBs
Position
complement(2750365..2752647)
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AA seq
760 aa
AA seq
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MSTLSQRPMNAIVGQEMPHEAANQHVTGAALYTDDLVGRTLGTLHAYPVQTAVAHGRVTS
MDVQPAYDVPGVVRVLTADDVPGVNDAGIKHDEPLFPTEVMYYGHPVCWVIGETLEAARL
GAAAVKVEIDELPALITVKEAIEAESFQGARPVMARGDLGAGWAASTRVFEGEFEFAGQE
HFYLETHCSLAQVDENGQIFIQCSTQHPTETQDIVAHVLGLDSNEVTVQCLRMGGGFGGK
EMQPHGYAAIGALAATLTGRPVRVRLNRTQDMTMSGKRHGFHSAWKIGFDDEGKIQAFEA
VLTSDGGWSLDLSEPVLARALCHVDNAYWVPNIRVDGRIAKTNKTSQTAFRGFGGPQGML
VMEDILGRVAPKLGMKAHELRRKNFYVDGQETPYGQPVRHAERAVACWEQVWQNGELDRR
MAEVDAFNATSPNTKRAIAITPVKFGISFNLTAFNQAGALVHVYKDGSVLINHGGTEMGQ
GLHTKMLQIAATTLGIPLDRVRLAPTRTDKVPNTSATAASTGADLNGGAVKDACEQIMVR
LEKVKAEAQEELSWEDLVHRAYFGRVQLWAAGFYRTEGLKWDPATVKGSPFKYFAYGAAA
TEVEVDRFTGAYRTLRVDIVHDVGDSLSPLIDIGQIEGGYVQGAGWLTLEDLRWDTSDRP
TRGRLATQGASTYKLPSFSEMPAEFNVSLLERAHEDGAVYGSKAVGEPPLMLAFSTREAL
RQAAAAFGDEGVSVEIGCPATPEAVFWALQEARGAAPTDG
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccctttcccagcgtccgatgaatgcgattgtcggacaagagatgccgcacgag
gctgccaaccaacacgtgacgggtgcggcgctctacaccgacgatctcgtgggccgcacg
ctcggcacgttgcacgcctatccggtgcagacggccgttgcgcacggacgtgtgacgtcg
atggacgtccagccggcgtacgacgtgcccggcgtggtgcgggtgctcaccgctgacgat
gtgcccggagtgaacgatgccggcatcaagcacgacgaaccgctcttccccaccgaggtc
atgtactacggccacccggtgtgctgggtgatcggggagaccctcgaagcggcccgactg
ggggcggctgcggtcaaggtcgagatcgacgagcttcccgcgctcatcacggtcaaggag
gcgatcgaggccgagagcttccagggtgcgcgtccggtgatggcccggggcgacctcggg
gctggttgggcggcgtccactcgggtctttgagggagagttcgagtttgccggccaggag
cacttctacctggagacccactgctcgttggcgcaggtcgacgagaacggccagatcttc
atccagtgcagcacccagcaccccaccgagacccaggacatcgtcgcgcacgtgctcggt
ctcgacagcaacgaagtgaccgtgcaatgcctacgcatgggtggcggcttcggtggcaag
gagatgcagccgcacggctatgccgctatcggtgccctggccgccactctcaccggacgc
ccggtgcgggtgcgcctcaaccgcacgcaggacatgacgatgtcgggcaaacggcacggt
ttccactccgcgtggaagatcggtttcgacgacgagggcaagatccaggcgttcgaggcg
gtgctcacctctgacggtggatggagtctcgacctctccgagccggtgctcgcccgcgct
ttgtgtcacgttgacaacgcctattgggtgcccaacatccgggtcgacggacgcatcgcc
aagaccaacaagacctcacagaccgccttccgtgggttcggcggaccgcagggcatgttg
gtgatggaggacatcctcggccgggttgccccgaagctggggatgaaggcgcacgaactg
cgccgcaagaacttctacgtcgacggccaggaaacgccgtacggccagccggtgcggcac
gccgagcgggccgtcgcatgctgggagcaggtctggcagaacggcgaattggatcgtcgg
atggcggaggtggacgcgttcaacgccaccagccccaacaccaagcgggccatcgcgatc
accccggtgaagttcggcatctccttcaacctcaccgccttcaaccaggcgggtgcgttg
gtgcacgtctacaaggacggctcggtgctgatcaaccacggcggcaccgagatgggacag
ggcctgcacaccaagatgttgcagatcgccgcgaccacgctcggcatcccgctcgacagg
gtgcgccttgctcccacccgcaccgacaaggtgcccaatacctcggccactgctgcgagt
acgggcgccgacctgaacggtggagcggtcaaggacgcctgtgagcagatcatggtgcgg
ctggagaaggtgaaggccgaggcgcaggaggagctctcctgggaagacctcgtccatcgt
gcctacttcggtcgggtgcaactgtgggcggccggtttctaccgcaccgagggcctgaag
tgggatcccgccacggtcaagggttcgccgttcaaatacttcgcgtacggcgcggccgcc
accgaggtggaggtcgaccgcttcaccggtgcctatcgcacgctgcgcgtcgacatcgtg
cacgacgtcggtgactcgttgtcgccgttgatcgacatcggtcagatcgaaggcggctac
gtgcagggagccgggtggctgaccctggaagacctgcgatgggacaccagtgatcgcccg
acccgtggccggctggccactcagggcgcctccacctacaagctgccgagcttctcggag
atgccggcggagttcaacgtgagtctgctggagcgggcgcacgaggacggcgcggtctac
ggcagcaaggcggtcggtgagccgcccttgatgctcgccttctccacccgcgaggcgctg
cgtcaagcggcagctgccttcggcgacgaaggagtcagcgtcgagatcggttgcccggcc
acgcccgaagcggtcttctgggcgctgcaggaagcgcgcggcgccgcaccgacagacggc
tga
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