Yimella sp. cx-51: J5M86_13495
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Entry
J5M86_13495 CDS
T07124
Name
(GenBank) DNA-3-methyladenine glycosylase 2 family protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
yim
Yimella sp. cx-51
Pathway
yim03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
yim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J5M86_13495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
yim03000
]
J5M86_13495
03400 DNA repair and recombination proteins [BR:
yim03400
]
J5M86_13495
Enzymes [BR:
yim01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
J5M86_13495
Transcription factors [BR:
yim03000
]
Prokaryotic type
Helix-turn-helix
AraC family
J5M86_13495
DNA repair and recombination proteins [BR:
yim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
J5M86_13495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Motif
Other DBs
NCBI-ProteinID:
QTH37844
LinkDB
All DBs
Position
complement(2832058..2832999)
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AA seq
313 aa
AA seq
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MEVIETIELPVPQPYDADGVFAFLAARAVDRVELVERSDATSRYVRTLALPGGPGLIDVV
HDGEVLPVTVHAAAAADVAPAVRLVSALFDLDHDAAAADSLLADDPSLADVVARNPGIRV
PGGLDPHELVVRALVGQQISVAAARTHLGRLAQFCGTPCPTQVSGVDRLFPSAASIAASV
PVPPPGQEPLDPNRPMRLPRRSIGDLVSTAAVLADGSLRVAADMEASELRAALIARPGIG
EWTAAYLAMRVLHDPDAWLTGDVALVAGARRLGIIDDSIPTAKAHRPLAEHASRWSPYRS
YAAMHLWRVAAQG
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
gtggaggtcatcgaaacgatcgagctgccggtgccgcagccctacgatgcggacggcgtt
ttcgcattcctggcggcacgcgctgtcgacagagttgaactggtcgagcgctccgacgcc
acctccaggtacgtccgcactctcgccctgcctggtggcccggggctcatcgacgtcgtc
catgacggggaggtcttgccggtgacggtgcacgccgccgcggccgccgatgtcgctccc
gccgtgcggctcgtcagcgcactcttcgatctcgaccatgacgcggcggccgctgattcg
ctgctcgccgatgacccttctcttgcggacgtcgtggcacgaaatccaggcattcgcgtg
ccggggggccttgatccccacgaactcgtggtgcgcgcactcgtcggccaacagatctcc
gtcgccgccgcgcggacgcatcttggccggctcgcccaattctgcggaactccctgcccg
acacaagtttccggggtcgaccgactgtttccctcggcggcgtccatcgccgcatccgtg
cctgtgccgccgcccggccaggagccactcgaccccaaccgcccgatgcgtctacccagg
cggtcgatcggcgacctcgtctccacggcagccgtgctcgccgatggctcactgcgggtc
gccgccgacatggaggcgtccgaactgcgcgccgcgctcattgcccgccctggcatcggc
gaatggaccgccgcctacctcgcgatgcgcgtcctgcacgatccggacgcctggctcacc
ggcgatgtcgcactggtcgccggggcgcgaaggctcggaatcatcgacgactcgattccc
accgcgaaggcgcaccgcccgctggccgagcacgcgtcgcgctggtcgccctaccgttcc
tacgccgcgatgcacctgtggcgggtcgcggctcaaggctga
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