Yimella sp. cx-51: J5M86_13730
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Entry
J5M86_13730 CDS
T07124
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
yim
Yimella sp. cx-51
Brite
KEGG Orthology (KO) [BR:
yim00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
yim02000
]
J5M86_13730
Transporters [BR:
yim02000
]
Other transporters
Pores ion channels [TC:
1
]
J5M86_13730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
Motif
Other DBs
NCBI-ProteinID:
QTH37882
LinkDB
All DBs
Position
2879778..2880857
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AA seq
359 aa
AA seq
DB search
MSVRTPRQSLAAVLAAAACLSLAACNNDTSVSGASSTSSASTSNVEQSEMSSTPSSSSSS
AASSAPSSSSSSASAEQPEAPAPTTDPGKADTLTLTGGWIVSGNFITLVYRNGMRYVVDA
GTAISNAKEGKYTSDRGTLTLRDGKATWAGKGFSARADVNRKGAGSVLDRSGVIAVTADG
SVACATDKRIAFVGVDGRRGEANTGGAVFIDKDGKRTSIGKPADQGRMIGRYSVCNVGGR
SSVEVFDDVLFDFGSDKLTSSGQALVKAAAATISGEVKGKTVRIVGHTDAKGSTQTNLAL
GKRRAQTVSDELKKLIPGLQTEVRSAGETQPTAPNLKADGADNPEGRALNRRVEISWAH
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtgcgcacaccacgtcagagccttgccgccgtcctggctgcagccgcatgcctg
agcctggccgcctgcaacaacgacaccagcgtgtccggcgcttcgtcgacgtccagcgcg
tcgacctcgaatgtcgaacaatcggagatgtcgtcgacaccttcctcgtcgtcatcgtcc
gccgcctccagcgcgccgtccagcagttcgagctcggcgagcgcggagcaacccgaggcg
ccggctcccaccactgatcctggcaaggccgacaccctcaccctcacgggcgggtggatc
gtcagcggcaacttcatcaccctcgtctaccgcaacggcatgcgttatgtcgtcgacgca
ggcaccgccatcagcaacgccaaggagggcaagtacacctccgaccgcggcaccctgacc
ctgcgcgacggcaaggccacctgggccggcaagggcttcagcgcgcgggccgacgtgaac
cgcaagggcgccggctcagtgctcgaccgcagcggcgtgatcgcagtgacggccgacggt
tcggtggcctgcgccaccgacaagcgcatcgccttcgtcggggtcgacggccgccgcggt
gaagccaacaccggcggcgccgtcttcatcgacaaggacggcaagcgcaccagcatcggc
aaaccggccgaccagggacgcatgatcggccgctacagcgtctgcaacgtcggcggacgc
agctccgtggaagtcttcgacgacgtgctcttcgacttcggcagcgacaagctgacctcc
tccggccaggcgctggtgaaggcggcagccgcgacgatcagtggcgaggtgaagggcaag
acggtgcgcatcgtcggccacaccgacgccaagggttcgacgcagaccaacctcgcgctc
ggcaagcgtcgcgcccagaccgtgtcggacgaactcaagaagctgattcccggcctgcag
accgaggtgcgcagtgccggcgagacccagccgaccgcgcccaacctcaaggctgacggc
gccgacaaccccgaggggcgcgcgctgaaccgccgcgtcgagatcagctgggcgcactga
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