Yimella sp. cx-51: J5M86_14485
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Entry
J5M86_14485 CDS
T07124
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
yim
Yimella sp. cx-51
Pathway
yim00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
yim00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
J5M86_14485 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
yim01007
]
J5M86_14485 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
yim03016
]
J5M86_14485 (serS)
Enzymes [BR:
yim01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
J5M86_14485 (serS)
Amino acid related enzymes [BR:
yim01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
J5M86_14485 (serS)
Transfer RNA biogenesis [BR:
yim03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
J5M86_14485 (serS)
Prokaryotic type
J5M86_14485 (serS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
CC149
FUSC
Motif
Other DBs
NCBI-ProteinID:
QTH38014
LinkDB
All DBs
Position
complement(3044812..3046125)
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AA seq
437 aa
AA seq
DB search
MIDIKFLRDNPDAVRASQRARGEDDSIVDQILDADKARRSSLSEFEQLRAQQKGVSKNVG
AVMGKLAKAKKAGEDVTALEQEADAARSEAATLAARVKELDAAADTEGATFDALMRKVGN
IVVDGVPAGGEENFNTLEEHGTKPEFDFEPLDHLALGEKLGAIDMERGAKVSGSRFYYLK
GPGAVLAQALMAYCQQIAREEGFTPLMVPNLVLRRTMAGAGFIDSHADEVYLLEADDLFL
TGTSEVALAGYHADEILDLNDGPRRYTATSTCYRREAGSYGKDTRGIFRVHQFTKTEMFI
YCKPEDAEAEHDRLLRIERRILDGLEVPYRVIDVAAGDLGGPAARKFDCEAWVPTQGTYR
ELTSTSNCTTYQARRLGVRFRADDGKPEIAATLNGTMLTDTRPIVALLENHQQADGSVKV
PAALQPFVGTDVLKPIA
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgacatcaagttcctgcgtgacaaccccgacgccgtccgagccagccagcgcgcc
cgtggcgaggacgacagcatcgtcgaccagatcctggacgccgacaaggcccgccgctcc
tcgctgagcgagttcgagcaactgcgtgcgcagcagaagggcgtcagcaagaacgtcggc
gccgtgatgggcaaactggccaaggccaagaaggccggcgaggacgtcaccgcgctggag
caggaggcggacgccgcccgcagcgaagccgcgacgctcgctgcccgtgtgaaggaactc
gatgccgccgccgacaccgagggcgccaccttcgatgcgctcatgcgcaaggtcggcaac
atcgtcgtcgacggcgtgcccgctggtggcgaggagaacttcaacacgttggaggagcac
ggcaccaagccggagttcgacttcgaaccgctcgaccacctcgcgctcggcgagaaactc
ggtgcgatcgacatggagcgcggcgcgaaggtcagcggcagccgcttctactacctgaag
ggcccgggcgccgtgctcgcccaggcgctgatggcctactgccagcagatcgcccgtgaa
gagggcttcactccgctgatggtgcccaacctcgtgctgcgccggacgatggccggcgcc
ggcttcatcgacagccacgccgacgaggtctacctgctcgaggccgacgacctcttcctc
accggcacctccgaggtggcgctcgccggctaccacgccgacgagatcctcgacctgaac
gacgggccgcgtcggtacaccgcgacgtccacctgttaccgacgcgaggccggctcctac
ggcaaggacacacgcggcatcttccgggtgcaccagttcaccaagaccgagatgttcatc
tactgcaagcccgaggacgccgaagccgagcacgaccgtctgttgcgcatcgagcgacgc
atcctcgacggtctggaggtgccctaccgggtgatcgacgtcgcggccggtgacctcggt
ggcccggcggcgcgcaagttcgactgcgaggcatgggtgccgacgcagggcacctaccgc
gagctgacctcgacctcgaactgcacgacgtaccaggcccgccgcctcggcgtccgcttc
cgcgccgacgacggcaagcccgagatcgccgccaccctcaacggcacgatgctcaccgac
acccgaccgatcgtcgcgctgctggagaaccaccagcaggcggacggctcggtgaaggtg
ccggccgcgctgcagcccttcgtcggcaccgacgtcctgaagccgatcgcctga
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