KEGG   Yersinia intermedia: CH53_110
Entry
CH53_110          CDS       T03608                                 
Name
(GenBank) hypothetical protein
  KO
K03658  DNA helicase IV [EC:5.6.2.4]
Organism
yin  Yersinia intermedia
Brite
KEGG Orthology (KO) [BR:yin00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:yin03400]
    CH53_110
Enzymes [BR:yin01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CH53_110
DNA repair and recombination proteins [BR:yin03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    CH53_110
SSDB
Motif
Pfam: Helicase_IV_N UvrD-helicase AAA_19 UvrD_C UvrD_C_2 AAA_12 AAA_30 AAA_11
Other DBs
NCBI-ProteinID: AJJ19207
LinkDB
Position
complement(125497..127551)
AA seq 684 aa
MELKATSFGKHLAQHPYNRVRLLNAGIEVCGDKHQYLIPFNQLVNIECKRGIVWGELEFE
LPDQQVVRLHGTEWQETQRFYQHLLGIWQQWSEEMSLVCVEVLHKQVESIKRIEQQDKWF
KRSELGLVQQSIREAFASLPVPVQRLTEFESCRADYELCLRWLQQGSRSVERRNQQWTNR
MLEEHQDFFQSVEASPLNESQSRAVVNGEDAVLVLAGAGSGKTSVLVARAGWLLRRNEAL
PEQILLLAFGRQAADEMNHRIKQRLAVDDIQAKTFHALALQIIQQGSRKTPIISKLESDS
QARRSLLIKNWQQQCSEKKAQAKGWREWLTDELEWAVDEGEFWQDKRLAARLAGRLERWL
GLMRMHGGSQAEMIEQADEEVRDLFQKRIRLMAPLLKAWKTALKEEGAVDFSGLIHQAVN
LLDKGRFVSPWKHILVDEFQDISPQRAMLLAALRKQNKQTCLFAVGDDWQAIYRFSGAQL
SLTTAFSQHFGEGAECALDTTYRFNDRIGEIANRFIQQNPHQLKKPLNSLSKGNKKSVII
LPDQQLETLLDKLSGFVKDDERILILARYHHLRPEILQKAATRWPKLTIDFMTIHASKGQ
QADYVIVAGLHEGNDGFPAVARESILEDVLLPAPEDFPDAEERRLLYVAITRAKHQVWLL
QDTAKPSIFVEQLSELGVPVQRKP
NT seq 2055 nt   +upstreamnt  +downstreamnt
atggaacttaaagcgacatcttttggcaagcatttggctcagcatccttacaatcgggtg
cgcttgctcaatgctggcatcgaagtatgcggtgataaacatcagtacctgattcctttt
aaccagttggttaacattgaatgtaagcgcggtattgtctggggcgaactggaatttgaa
ttgccagaccaacaagttgtccgtttacatggtactgaatggcaggaaactcaacgtttc
tatcaacatttactgggcatctggcagcaatggagtgaagagatgagcctggtttgtgtt
gaggttttacataaacaagtggaatcaatcaagcgaattgaacaacaggataaatggttt
aagcgcagtgagttagggttggtgcagcagtccatccgtgaggctttcgcctcattaccg
gtaccggtacagcgcttaaccgagtttgagtcctgtcgtgcagactatgagctttgtttg
cgctggttgcagcaaggcagtcgcagtgtggagcgccggaatcaacaatggaccaaccga
atgttggaggagcatcaagatttcttccaaagtgtagaagcctctcctctaaatgaatcg
caaagccgtgcggtggtcaacggcgaagacgcggtattagttctggccggtgccgggagt
ggtaaaacatcagtgctggtggcccgtgctggttggttgttacgccgtaatgaggcatta
ccagagcagattttactgctcgcatttggccgccaggcggctgatgagatgaatcatcgc
attaagcaacggttagctgtggatgatattcaggctaaaaccttccatgcactggcattg
cagattatccagcaaggcagccgtaaaacgccaataatcagtaaactggaatcagatagt
caggccagaaggtcgttactgattaaaaattggcaacagcagtgcagtgagaaaaaagcg
caggctaaagggtggcgtgagtggctaacggatgagcttgagtgggcggttgatgaaggt
gagttttggcaagataaacgcttggcagccagattggcggggcggctggagcgttggtta
gggctgatgcgaatgcacggtggcagtcaagccgaaatgattgagcaagctgatgaagaa
gtgcgtgatctcttccaaaagcgtatacgcttaatggctccactattgaaagcgtggaaa
acggcgttgaaagaagaaggggcggttgatttctctggtttgatccatcaggcagttaac
ttattggataaagggcgttttgtcagcccgtggaagcatattctggttgatgagtttcag
gatatctcaccacaacgcgccatgttgttggcagctctgcgcaaacaaaataaacaaacc
tgcctgtttgcagtaggtgacgattggcaggcgatttatcggtttagtggcgcccagctt
tctctcaccacggcttttagccagcactttggtgaaggggcggaatgtgccttggatacc
acctatcgttttaatgacaggatcggtgaaattgcgaaccggtttattcagcaaaaccca
catcaattgaaaaagccacttaacagcttgagtaaaggtaacaaaaagtcagtcattatc
ttgccggaccaacaacttgaaacgctgctggataaattaagcggttttgttaaggatgat
gaacgtattctgattttggcccgctatcatcatttgcggcctgagattttgcaaaaagcg
gcaacgcgctggccaaaactgacgatcgattttatgactattcatgctagcaaagggcag
caggcagactatgtgattgttgccggtttgcatgaaggaaatgatggttttccagcagtt
gcacgggaatcaattctggaagacgttctgttaccggcaccggaagatttccccgatgcg
gaggagcggcgtttattgtatgtcgcaataacgcgtgcgaagcatcaggtctggttactg
caagatacagccaaaccctctatttttgttgagcaacttagtgagttaggtgttccagtt
cagcgtaaaccctag

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