Yersinia intermedia: CH53_1163
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Entry
CH53_1163 CDS
T03608
Symbol
lsrB
Name
(GenBank) autoinducer 2-binding protein lsrB
KO
K10555
AI-2 transport system substrate-binding protein
Organism
yin
Yersinia intermedia
Pathway
yin02010
ABC transporters
yin02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
yin00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CH53_1163 (lsrB)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CH53_1163 (lsrB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
yin02000
]
CH53_1163 (lsrB)
Transporters [BR:
yin02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
AI-2 transporter
CH53_1163 (lsrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Glyco_tran_WecG
Lipase_GDSL
Peripla_BP_6
Motif
Other DBs
NCBI-ProteinID:
AJJ20812
UniProt:
A0A0T9N583
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All DBs
Position
1337803..1338822
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AA seq
339 aa
AA seq
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MKTQRLKKLALVCALGFACITTAQAAERIAFIPKLVGVGFFTSGGKGAVDAGKELGVDVT
YDGPTEPSVSGQVQLINNFVNQGYNAIVVSAVSPDGLCPALKRAMQRGVKILTWDSDTKP
ECRSVYINQGTPNQLGSMLVDMAANQVKKDKAKVAFFYSSPTVTDQNQWVNEAKKKIQQD
HPGWEVVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKRDNVA
IVGFSTPNVMRPYVERGTVKEFGLWDVVNQGKISVYVANEMLKKGDLNVGDKIDIPNIGV
VEVAPNSVQGYDHEAKGSGIVLLPQRVIFTKDNINKYDF
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacacaaagattaaaaaagctggcactggtttgtgccctaggatttgcctgtatc
actactgctcaagcggcagaacgcatcgcatttatcccgaaactggtcggggtcggcttc
ttcaccagtggcggtaaaggtgccgttgatgccggtaaagagctgggtgtggatgtgact
tacgatggcccgacagaaccaagtgtttccggccaggttcagttgatcaataacttcgtc
aatcaaggttacaacgccattgtggtctcggcagtctcgccggatggactgtgcccagcg
ttaaaacgcgcgatgcaacgtggcgtcaaaatcttgacctgggactctgataccaaacca
gaatgtcgttcggtttatatcaaccaagggaccccaaatcaattgggttcgatgttggtc
gatatggccgcgaatcaagtgaaaaaagataaagccaaggtcgcgttcttctattccagc
ccgacggttaccgaccaaaaccaatgggtcaatgaagcgaagaaaaaaatccaacaagat
caccccggctgggaagtggtcaccacccagtttggctataacgatgcgacaaaatcgctg
caaaccgctgagggcatcttaaaagcttatagcgatctggatgccattattgccccagat
gccaacgcactgcccgccgccgcacaagccgcagagaacctgaaacgcgacaatgtggcg
atcgtcggcttcagtaccccgaacgtgatgcgcccttatgttgagcgcggcacggtcaaa
gagttcggtctgtgggatgtggttaatcaaggaaaaatctcggtatatgtcgccaatgaa
atgctgaaaaaaggcgacctgaatgtcggcgataaaattgatatcccgaacattggggtg
gttgaagtggcaccgaacagcgttcagggctatgaccatgaggccaaaggaagcggcatt
gtgttactgccacagcgggtcatctttactaaagacaacatcaacaaatacgatttttaa
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