Yersinia intermedia: CH53_1183
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Entry
CH53_1183 CDS
T03608
Name
(GenBank) hypothetical protein
KO
K15125
filamentous hemagglutinin
Organism
yin
Yersinia intermedia
Brite
KEGG Orthology (KO) [BR:
yin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
yin00536
]
CH53_1183
Glycosaminoglycan binding proteins [BR:
yin00536
]
Heparan sulfate / Heparin
Microbial pathogens
CH53_1183
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fil_haemagg_2
TPS
PT-VENN
Ntox50
DUF6862
ESPR
Fil_haemagg
Motif
Other DBs
NCBI-ProteinID:
AJJ18427
LinkDB
All DBs
Position
1355214..1363007
Genome browser
AA seq
2597 aa
AA seq
DB search
MNKNLYRIVFNKARGLLMVVADIAASGRATSSPSSGVGHTQRRRLSTLSPLSFSLLLAFG
CVSLSAQATIVADASAPGNQQPTIINSANGTPQVNIQTPSSGGVSRNVYSQFDVDNRGVI
LNNGQGVNQTQLGGFVSGNPSLARGEASIILNEVNSRDPSRLNGYIEVAGRKAQVVIANP
AGITCEGCGFINANRATLTTGQAQLNNGQLTGYDVDRGEIVIQGKGLDSSRQDHTDLIAR
SVKVNAGIWANDLKVTAGRNQVDAAHQNITAKADDGSARPTVAVDVASLGGMYAGKIRLI
GTESGVGVRNAGEIGASAGDISITADGMLINSGQINSAQHLAVKTTTGIANAGVLYAQGN
TQLTTAGTLNNTGTVAAAGDTSLRAAEVNSSRNSLLGAGVKSDNSSVTSGTLSIDASGQL
IAQGKNISGTAQNLNAHSIDLSGSQTQSRDITLTTQGGAIDLTGANLSASQHLSASTAAQ
LRTDSARLIADQVTLNAQSLSNVGGVIAQTGTTDFNLTLPGDIDNRGGTLLSGGKLSLQA
ENLNSNGNSLLGAGVQSDGRLTDVGDLMVTTRQDLIAHGQTLAAGAMTLTGSRVNLADSH
TQAREMNIIANSGDISTQRANIISLGSLTITAGANAGQTLNNQGGALAANNIALNLGQLD
NNAGKVTASQDLSLGLQNDFNNLAGSTLQAGHDLTLSTDGTLTNDGQLVAGGKLSTHSAS
LLNNGNISATQASLTATGALTNRGEILTRGRLDTDTNTLFNTGSLISAEATLKARDRITN
SGPNALIGATDENGTLALLAPVIENSDTVTHTDSAPTTTLLGMGKVILAGGQDNGGNYLT
AAQILNISGLIESGKDMLIYATTLTNRRHILTANTQFVTGNTVSGSAYWSPTNPDVPGGR
YAEPPHGGSMNSDYIGTNYTSTYAHNSIDKISPEAHLLTGGNLTPQVGTLENFWSKISAQ
GEISLSGVALQQDGWGNAQRLIERTTSSGEWRYRTYKGNLWGTGWGPEVKEHATNQYASS
LTAKTISGSGTTINNGANPGSIAPPDGRDHTGKDIAIEFNGISLTQPNGGLYKFNTDYTV
GGGGYLIETNPAFANLNNWRGSDYVLQQLNNNPAFIHKRLGDNAYEQRLVRDQVLALTGQ
AVASSYTSAQEQFEQLFAAGLEYSKAFNLALGTHLSAEQMAALTRNIVLMESRDVAGQTV
LVPVVYLAGVKPGDLQANGALIAANNIELTDMQGLTNQGAIKASNDLRINMAKDITLTSN
GGLLQAGGNMQLSTLNSDIDLTGTRLNATNLQLDSGRDVILRTDSEQLSSSNGAVLRNQT
LLGPLASINVSNNAVINTDRDFLLQGASVNVGKDLQVNTGGDWILNTVERSDQISADYGY
GHATSEHIRHLSSEVNVGGALAAKVDNLTAVGANINAGTLDVQAQNINLSAATDSLQVTG
KAVTKRHSDSVDLYDETLLGSQLNAKGDINLQAAKDITLSASTVQTDGALKLAAGGDVTL
TTQTEQHDELRIHTGKHKGLASSSTTHTEDSRSQTLAVGSMLSAGSINVSGNNIAVTGSN
VVADNDINLRAKENLTVSTAQQSESESHLYEKKKSGLSTNGGIGVFIGSSSQKTTDKTQT
LSNVGSTIGSLGGDVTLNAGNQLTIHGSEVIANKDISLQGSDVAITAAENNLSQQHTTES
KQTGFTLALSGAVGSAINSAVTTAQDAKKETNGRLQALQTTKAVLQGVQAAQGAVLANET
GDPNAVGVSISLGSQKSKSESRLEQTTASGSNIAAGNNLSITATGDKGPGDIRVQGSELQ
AGKNLSLDAKNDIALNSAENSERLRGSNKSSGGNIGIGIGVGKGAGISIFAGVNASKGKE
QGDSLTHTESQLKAGDTVSITSGRDTSLKGAQVSGETVKVDVGRDLTLQSEQDRNNYDSK
QTSVSASGSFTFGTMTGSGSVSASKSKIDSDYTSVQEQTGFFAGKGGFDITVGEHTQLNG
AVIGSTATADKNTLDTGTLGFSDLDNQASFNTSTSSMGLSSGGFTGSKDFISNMGGGIPI
AGGNSGDASSTTHAAVSDGTITIRNTDKQQQNVTDLSRDAEHANNALSPIFDKEKEQNRL
REINLIGEIGNQVGDIARTQGKIAEEKALKDPQAIQAAKEALAAKGNLTPTEKQLTEQIR
NTAMATYGTGSDLQRAIQAATAVTQGLTGGNLGQALAGGSAPYLAHEISKYLPADQNQTA
NLMAHAVLGAVVGHFNGNATVGAVSAFTAEAAAPAIINAMGWDKDHLTEQQKQTVSALGT
LAAGLAGGLVGDSSNSAVAGAQAGKNAVENNTLSSKDEKLRQDAKWSLPYLEGDKKVQAE
KLVTDLDAKDKAFDAAIDAACKHLSSAQCRGMRQELAAMGKSYDEQMDGQYIGTMASVYK
EGAEKVDGLMWQYATADAQAQKAKDIQTIASNWGVSIETASALYTGMAITHTTAAIGGAV
YGMKGLDVPATNNPSTLVQETVTAKGATAGSGSVSKVSINQGQQNKHIPGTNEYKIASDA
GLNKSTVTASSEVLLQKVGSGQQVGNVAIGIPGSKERINYGQVIGNYIDPQTGISTPTTK
GIVHYGKNGVHIVPARP
NT seq
7794 nt
NT seq
+upstream
nt +downstream
nt
atgaataagaacctgtaccgtatcgttttcaacaaagcgcgtggcttattaatggtggtg
gccgatatcgccgcctccggtcgggccacctcgtcaccgtcgtccggtgttgggcatact
cagcgccgccgtctcagcaccttatcgccattgagttttagtctgttactggcgttcggt
tgcgtctcgttatccgcgcaggccactattgtcgccgatgccagtgcgccggggaaccag
caaccgaccattatcaacagcgccaacggtacgccacaggtgaatatccagacgcccagc
agtggcggtgtttcccgtaacgtttacagccagtttgatgtcgataatcgtggcgtgatc
ctcaataacggccagggtgtcaatcagacgcaactcggcggttttgtcagcggtaacccc
tcactggcacgcggtgaggccagtattatcctcaatgaagtcaacagccgcgatcccagc
agactcaacggttatatcgaggtggccgggcgcaaagcgcaggtggttatcgccaacccg
gcgggcattacctgcgaaggttgtggttttattaatgccaaccgcgcgaccttaactacc
ggtcaggcacaactcaataacggccagctcactggctacgatgtggatcggggtgagatt
gttattcagggcaaaggtctggacagcagccgtcaggaccataccgacctgattgcccgt
tcggttaaagtcaatgccggtatctgggccaatgatctaaaagtcaccgccgggcgcaat
caggttgacgccgcgcaccagaatattaccgccaaagccgacgatggcagcgcccgccct
accgtggcggtggatgtggcgagtttgggcggcatgtacgccggtaaaattcggctgatc
ggcactgaaagcggtgtcggggtgcgtaatgcgggtgaaataggcgcttcagcgggcgat
atctccattacagccgacggtatgctgatcaacagcggccagatcaacagtgctcagcat
ctggcggtgaagaccaccaccggtatagcaaacgcaggagtgctttatgcacagggcaat
acccagctcaccaccgcaggcacgttgaataacaccggcactgtcgcggcggcgggtgat
acttcgctgcgcgcagctgaagtcaatagcagccgcaattctctcttgggcgcgggcgtc
aaatccgacaacagcagtgttaccagcggcactcttagcattgatgccagcgggcagtta
atcgcccaagggaaaaatatcagtggtacggcgcagaatctcaacgcgcacagtatcgat
ctcagtggcagccaaactcaaagccgtgatatcacattgaccacccaaggcggggctatc
gatctcactggcgcgaacctctccgccagccaacatctgtctgcttcgaccgccgcgcaa
ttacgtaccgacagcgcccgcctgattgcagatcaagtgacgctgaacgcccaatcgctc
tccaatgtcggcggggtaatagcgcaaaccggtaccacggacttcaatctgactctgccg
ggtgatattgataaccggggcggcaccttgctctctggcgggaaactctcactgcaagct
gaaaacctgaacagcaacggcaacagcctgttgggtgcaggtgtacaaagcgatggacgg
ctgacagatgtcggtgatctgatggtaaccacccgccaggacttaatcgcacacggtcag
accctcgccgccggtgccatgacgctaaccggcagccgagtcaatctggctgacagccat
acgcaagcccgcgagatgaatattatcgccaacagtggcgatatcagcacgcagcgcgcc
aacatcatctcccttggctcgctgaccattactgcgggggcaaatgcaggtcaaacgctc
aataaccagggcggtgcgctggcggcgaataacatcgcattgaacctgggccagcttgac
aataacgccggtaaggttaccgccagtcaggatctgagccttggtttgcagaacgatttc
aataatctggccggttcgacacttcaggccgggcatgatttaaccttgagcactgacggc
acgttaaccaatgacgggcaattagtggcgggcggcaaactcagcactcactcggccagt
ttattgaataacggcaatatcagtgcgacccaagccagcctcaccgcgacgggcgcattg
actaaccgtggcgagatcttaacccgtggtcggctcgataccgacactaacaccctgttc
aacaccggctccctgatcagtgcagaagccacgctgaaagcgcgggatcgtatcaccaac
tccggccctaacgccctgatcggtgccaccgatgaaaatggcaccttagccctgctggca
ccggtgattgagaacagtgataccgtcacccacaccgacagcgccccaaccaccaccctg
ttagggatgggcaaggtcattctggcgggcgggcaagataatggcggaaattacctgacg
gcggctcagatcctcaacatttccggtctgatcgaatccggcaaagatatgttgatttac
gccacgacactgaccaatcgccgccatattctcactgccaatacacaatttgtgacgggc
aataccgttagcggatcagcttactggtcgccaaccaatcctgatgtaccgggtggtcgc
tatgctgaaccgcctcatggcggctcgatgaacagtgattatattggcactaattatacg
tcgacttacgcccataacagcatcgataagataagccctgaagcacacctgctcaccggt
gggaacttgaccccgcaggtaggcacgttggaaaacttctggagtaaaatcagtgcacag
ggcgagatttcactctcgggcgtggctctgcaacaagatggctgggggaatgcacaacgc
ctaatcgaaagaaccacctccagcggtgagtggcgctaccgcacttacaaaggcaatttg
tggggcaccggttgggggccggaggtcaaagaacacgcgaccaaccaatacgcctccagt
cttaccgcgaaaaccattagtggcagtgggacgacgatcaacaatggcgccaaccccggc
tcaatcgcaccaccggatggccgcgaccataccgggaaagatatcgccattgagtttaac
ggtatctccctgacacaacccaatggcggactgtataaattcaataccgactacaccgtg
ggcggtggcggttatctgattgaaaccaaccctgcttttgccaatcttaataactggcgc
gggtcagactacgtgctccagcagttaaataacaatcctgctttcatccataaacgcctg
ggtgataacgcctatgagcagcgtctggtgcgggatcaagtgctggcgctgaccggccaa
gcggtcgccagtagttatacaagtgcccaagaacagttcgaacaactctttgcggcgggg
ctcgagtacagcaaggcgttcaatcttgcccttggcacccacctcagtgcggaacagatg
gcggcattgacccgcaatatcgtgctgatggaaagccgtgacgttgccgggcaaaccgtg
ctggtaccggtggtctatctggcaggcgtcaaaccgggtgacttacaggccaacggcgcg
ttgattgccgccaataatatcgaactcaccgatatgcaggggttaaccaatcagggggcg
attaaagccagcaatgacctgcgcattaacatggcaaaagatatcaccctgaccagcaat
ggcggcttacttcaggccggtggcaacatgcagctcagtacattgaacagtgatattgac
ctgactggtacgcggctaaatgccactaacctgcaactggatagcgggcgcgatgtgatc
ctgcgcacggacagtgagcaactcagtagcagcaatggcgccgtgctgcgcaatcaaacc
ctgctggggccgctggcgagtatcaatgtcagtaataacgccgttatcaataccgaccgt
gactttctcctgcaaggcgcaagtgtgaatgtcggtaaagatcttcaggtcaataccggc
ggcgactggatcctcaataccgttgagcgtagtgaccagataagtgcggattatggttat
ggccacgccaccagtgaacatattcgtcatctgagtagcgaggtgaatgtcggtggtgcg
ttggccgcgaaggtcgacaatctgaccgccgtgggcgcaaacattaacgccggcaccctt
gatgtacaggcgcaaaacattaacctcagtgcagcgaccgacagcctacaggtcactggc
aaagccgtcaccaagcgccatagcgactcagtggatctctatgatgaaaccctgctcggc
agccagttgaacgccaagggcgatatcaatttacaggcagcaaaagacatcaccctcagc
gccagcacggtacaaaccgacggcgcactgaagctggcggcgggcggggatgtcacgctc
accacccagaccgaacagcatgatgaactgcgaattcataccggtaagcacaaaggtctg
gcgtccagttccaccacgcacaccgaagacagccggagccagacactggcggtcggctcc
atgttgtcggcgggttctatcaatgtcagtggcaacaatatcgcggtcaccggcagtaat
gtggtggccgataacgatattaatctgcgggctaaagagaacctcaccgtcagcaccgcg
caacagagcgagagcgagtctcacctgtatgagaagaaaaaatcgggtctctccaccaat
gggggtattggggtattcatcggttcttcaagccaaaaaaccaccgacaaaacgcagact
ctgagtaacgtcggtagcacaattggcagtctggggggcgatgtcactcttaatgcagga
aatcagttaactattcatggcagcgaagtgatcgccaataaagacatcagcctgcaagga
tcagatgtcgcgataactgcggcggaaaacaacctgtctcaacaacataccaccgagagc
aaacagaccggattcaccctcgccctgtcaggtgcggtaggcagtgccatcaacagcgcc
gtcactaccgcccaggatgccaaaaaagagaccaatggccgcctccaggcattgcagacc
acaaaagcagtccttcagggcgttcaggcagcacaaggcgcggtgttggccaatgaaacc
ggcgaccccaatgcggtaggggtaagcatttcactgggcagccaaaaaagtaaatcagaa
agtcgccttgagcagactaccgccagcggcagcaacattgctgccgggaataatctttct
atcaccgccaccggagacaaggggccgggcgatattcgggtacaaggcagcgagctacag
gcagggaaaaatctcagtctggatgccaaaaatgatattgcgctgaacagtgctgaaaat
agtgagcgtctgcgtggcagtaataaaagttcgggcggcaatattgggataggtattggc
gtcggaaaaggggccggtatcagtatctttgcgggtgtaaatgccagtaaaggcaaagag
caaggcgatagcctgacccatactgaaagccagttgaaagcgggcgatacggtgagcatt
accagtggccgcgatacatccttgaaaggcgcgcaggtcagcggcgaaacggtaaaagta
gatgtgggccgtgatttaaccctgcaaagtgagcaagaccgtaacaactacgacagcaaa
cagaccagcgtgagtgccagtggcagcttcacctttggcaccatgaccggcagcgggagt
gtcagtgccagtaagtctaaaattgactcagactacacatcagtacaggagcagaccggg
ttctttgctggcaaagggggttttgatatcaccgtcggcgagcatactcagctcaatggt
gcggtgattggctcgacggccactgccgataaaaacactttggatactggcacgctcggt
ttctcggatctcgataatcaggccagtttcaacacctcgaccagtagcatgggcctgagt
agtggcggttttaccggcagcaaggactttatcagtaatatgggcgggggcatccccatc
gcgggcggtaatagtggtgatgccagttccactacccatgcggcagtatccgatggcact
atcaccattcgcaataccgataaacaacaacaaaatgtcactgacctgagccgtgatgct
gaacacgctaacaatgccctctctcctattttcgataaggagaaagagcaaaatcgccta
cgggaaatcaatttgatcggggagataggcaatcaggttggcgatattgcgcgcacgcag
ggtaagatagcggaagaaaaagcgctgaaagatccgcaggcgattcaggcagcaaaagaa
gctctggcggcgaaaggtaacctgacgccaacggaaaaacagctgaccgaacagatacgc
aataccgcgatggcaacctacggcaccggcagtgatttacaacgggcgatccaggccgcg
actgcggtcactcaggggctgaccggcggtaaccttggtcaggcgttggcaggcggcagc
gcaccgtatctggcgcacgaaatcagtaaatatctgcccgccgatcagaaccagactgcg
aacctgatggcccatgcggtgttgggtgcggtggtcgggcactttaacggcaatgcaaca
gtcggtgccgtatcagcctttacggcagaggccgccgcacccgcaattatcaacgcgatg
ggctgggataaagaccatctcaccgaacagcagaaacaaaccgtcagtgcgttgggtacc
ctggcagcagggctggcgggtgggttggtaggtgacagcagcaatagcgcagtggctgga
gcgcaggctgggaagaatgcggttgagaataatacattatcctctaaagatgagaagctg
cgtcaggatgcgaagtggtcactgccttatctggaaggtgataagaaggtacaggctgaa
aaactggtcactgaccttgacgcgaaagataaagcgttcgatgcagccatagacgcagca
tgtaagcatctgtcatcagctcagtgcaggggaatgcggcaagaactggccgcgatgggc
aaaagttatgatgaacaaatggatggccagtacatcggcactatggcaagtgtttacaaa
gagggggcggagaaagtcgatggtctgatgtggcaatatgcaacagcagacgcacaagct
cagaaagccaaagacatccaaactatagcgagtaactggggcgtcagtatcgagacagcc
tccgcactgtatacaggaatggcaataacgcataccacggcggcgattggtggtgcagtg
tatgggatgaaggggttagatgttcctgcgacaaataacccaagtacgttggtacaagaa
acggtgacagcaaaaggggcgacggcaggctcgggttctgtaagtaaagtgtcaattaac
caaggccaacagaataaacatataccaggtacgaatgaatacaaaatagcttctgatgcg
ggtttaaataaaagtactgtcacagcgtcttcggaagtgttgttacagaaagtcgggagt
ggtcaacaggttgggaatgttgccatcggaattccaggttcaaaagagagaattaattac
ggtcaagtgatcgggaattatatcgacccacaaactgggatctctacgccgacaaccaaa
ggtattgttcactatggtaagaatggtgttcatattgttccagcaagaccatga
DBGET
integrated database retrieval system
