Yersinia intermedia: CH53_1204
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Entry
CH53_1204 CDS
T03608
Name
(GenBank) bacterial Ig-like domain family protein
Organism
yin
Yersinia intermedia
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IAT_beta
Big_1
Invasin_D3
Invasin_D4
CarboxypepD_reg
MAP
MG4
Ig_DR_A0283-like
CBM60
Big_3_5
Motif
Other DBs
NCBI-ProteinID:
AJJ19765
UniProt:
A0A0T9LZL0
LinkDB
All DBs
Position
complement(1383272..1386463)
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AA seq
1063 aa
AA seq
DB search
MSLHRVTSPPQTKQLNKTRIAKSVVWANIVIQTAFPLSIAFTPAVMAAETVDVSSSQAEQ
TTANAATRLASVLADGDSAKQASSIARGTATSAGNEAVQKWLNQFGSAKVQLNLDEKLSL
KGSQLDVLLPLTDSPDLLTFTQLGGRYIDDRVTLNFGLGQRHFFAQQMLGYNLFVDHDAS
YSHTRIGVGAEYGRDYINLAANGYFGVSGWKNSPDLDKYDEKVANGFDIRSEAYLPALPQ
LGGKLVYEQYFGDEVGLFGVDNRQKNPLAVTMGVNYTPIPLFTVGVDHKMGRAGMNDTRL
NLGFNYAFGTPLAHQLDPNTVAIKRSLIGSRYNLVDRNNQIVMKYRKQNMVTLELPARVS
GSARQTMPLVANATAQQGLDRIEWETSALTLAGGKMTGSANNWQVTLPSYLPGGQGNNTY
RISAIAYDTQGNASPVAYSDIVVDDSGVNTKTSSMVASPATLPANAVASSVIELNIKDNN
NQPITGIVDELTFSLELAELPDAKRARVARAAPLPSVEHSITQISESAPGVYQATLTAGS
KPQLINISAQINGVPLNDVKTKVSMVADEASATIQDNSLQVVTNGSLANDVAANQVKAVV
VDAYGNKLSGVTVNFTVDADANIVATTTSDNQGVATATITSTKAASYTVKAELNGETQQV
DMNFIADVGSATLSGSAEHKLQLVTDGQPADGSSANSVKLTVVDKFGNTVPNISVAFSTV
SDATISEFTATDDNGVATAKITSTKAGNYTVTANLNGAEQQVEVNFIPDATTATITADDF
TVEVNNQTAGSGTNRVQAIVLDKQGNPVPNMTVTFSATNGVTVKTASVQTGVDGKAITDL
TMTNVGGTISTITAAMTNTAGVSSSHDKDVTFYPDFSKASLNTPVNAYSGFSVSDGFPTK
GFKNANFQIAPHGNVASNSNYEWASSDANVSVSSSGLVNLDNDTTGTVTITAAWKLDKSK
VFTYQFKLDSWVGHFNASTVTWAAANSACIAQGMRLPGNNEVSTGVAARGIGTFFGEWGN
LNSYPDFPTATIMWTSTEGYDFHPNTGEVHSVGNSAVAYMCVR
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgcatcgtgtaacatctccacctcaaaccaaacagttaaataaaactcgaatt
gcaaaatcagtcgtctgggcaaatattgtcatccagacagcatttcctttgagtattgct
tttacccctgcagtcatggcagctgagaccgttgatgtctcgagttcacaggctgaacaa
actacggctaatgcagcaacgcgtttggcgtcggtattggcagatggtgactcagccaaa
caagcgagctccattgcacgcggcactgccaccagtgcaggtaatgaagccgtacaaaag
tggcttaaccagtttggtagtgcgaaagtacaacttaatctggatgagaaactgagcctt
aaaggcagccaattagatgtgttgctgccactgaccgacagcccggatttactgactttt
actcagttgggcggtcgctacattgatgaccgtgtgacattgaactttggcctgggccaa
cgtcatttctttgcgcagcaaatgctgggctataacctatttgtcgatcatgatgccagc
tatagccatacccgtattggcgtcggtgctgaatatggtcgtgattatattaatctggcc
gccaacggttactttggtgtgagtggttggaaaaactcaccagatcttgataaatatgat
gaaaaagtcgcgaacggctttgatatacgtagtgaagcttatttaccagcattgccacaa
ttgggtggtaagttggtttacgaacaatattttggtgatgaagttggcttgtttggcgta
gataatcgccagaaaaacccacttgcagtcactatgggcgtgaattataccccaattcct
ttattcactgttggcgtcgaccataagatgggacgtgcaggaatgaatgacacccgtttg
aaccttggatttaactatgcattcggcaccccgctggcgcaccagctcgatcctaacacg
gtagccattaagcgtagcctgattggcagccgctataatctggtcgatcgtaataatcag
atcgtgatgaaataccgtaagcagaatatggttaccctcgagttaccagcacgtgttagc
ggttcagcaagacaaaccatgccattagtggcaaatgctacggcgcagcaaggtctggat
cgtattgagtgggaaaccagtgcattgacgctggctggcgggaaaatgaccggtagcgcc
aataattggcaagtaacattaccaagctatctaccgggtggtcagggaaataacacttat
cgtatcagtgccatcgcttacgatacgcaaggtaatgcttctccggtcgcttatagcgat
attgtcgtagatgacagtggtgtgaacaccaagacctctagcatggtcgcttcaccagcc
actctgccagcaaatgccgtcgcaagcagcgttattgaacttaatatcaaggacaataac
aaccaaccgattacgggtattgttgatgaactgacattctcacttgaattggcagaattg
cctgacgcaaaacgcgccagagttgcacgtgcagcaccattgccaagtgtcgaacattcg
ataactcaaattagcgagtcggctccgggtgtttatcaagccacgcttaccgcaggcagc
aaaccacaactgattaatattagcgcccagattaatggtgtgccgctaaatgatgtgaaa
acgaaagtgagcatggtcgctgatgaagcaagtgcgacaatacaagacaatagcctgcaa
gttgtgaccaatggcagcttagctaatgatgttgcggcgaaccaagtgaaagcggtagtg
gttgatgcctatggcaataaattgtccggggtaacagtcaatttcaccgttgatgcagac
gctaacattgttgcgacaacaaccagtgataaccaaggggtagcaacggcaacgatcacc
agtactaaggctgctagctataccgttaaagccgaactcaatggtgagacacaacaggtt
gatatgaactttatcgccgatgttggcagtgccacgctgagtggtagcgctgaacataaa
ttgcagctagtgactgacggccaacctgccgatggtagcagcgccaacagtgtaaaactg
accgttgtagataagttcggtaacaccgtgcctaatatcagcgtcgctttcagtacagta
agcgatgctacaatcagtgaattcaccgcaaccgacgacaacggtgtagccacagcgaaa
atcactagcaccaaagcgggcaattataccgtgacagcaaaccttaatggcgcggagcaa
caggtggaagtgaactttatccctgatgcgactaccgcaaccattaccgcggatgatttt
actgtggaagtcaataatcaaactgcgggcagcggcaccaacagggtacaagctatcgtg
ctggataagcagggaaatccagtccctaacatgacggtgactttcagcgcgaccaatggt
gtcacagtaaaaacagcgtcagttcaaacgggtgttgatgggaaagccattactgacctt
actatgacgaatgtcggcggcaccatcagtacaataacagccgcgatgactaacacggcg
ggtgtcagcagctctcatgataaagacgttacgttctatcctgatttctctaaagcatca
ctgaatacaccagtcaatgcttatagcggtttcagtgtaagtgatggtttcccaaccaaa
gggtttaaaaacgccaacttccagatagcgccgcacggcaatgttgccagcaacagcaac
tatgagtgggcgagtagcgatgcaaacgtgagtgtaagcagttcaggtttggttaatctt
gataatgacaccactggaacagttaccattactgctgcatggaaactagacaagagcaaa
gtattcacttatcagtttaaattagactcttgggttggccactttaacgcatctacagtg
acttgggctgctgctaatagcgcctgtattgctcaagggatgagattgcctggaaataat
gaagtatctactggagtggcagcacgtggtattggtactttctttggtgaatggggaaat
ctgaatagttatcctgacttcccaacagcaacaattatgtggacgtcaaccgagggttat
gatttccatccaaacactggggaagtgcattcggtaggtaactccgccgtggcttatatg
tgtgtcagataa
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