Yersinia intermedia: CH53_1265
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Entry
CH53_1265 CDS
T03608
Name
(GenBank) beta-eliminating lyase family protein
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
yin
Yersinia intermedia
Pathway
yin00330
Arginine and proline metabolism
yin00480
Glutathione metabolism
yin01100
Metabolic pathways
yin01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
yin00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
CH53_1265
09106 Metabolism of other amino acids
00480 Glutathione metabolism
CH53_1265
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
CH53_1265
Enzymes [BR:
yin01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
CH53_1265
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
GKRP_SIS_2
Motif
Other DBs
NCBI-ProteinID:
AJJ18404
UniProt:
A0ABX6FDX8
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All DBs
Position
1450873..1453035
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AA seq
720 aa
AA seq
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MKKLNIAASLSAMPCFESQREVVDVLHTDFTDIAAVVLSVQDINNGVIESIHELGLEIPI
FAAVCCEEELNTDVLPSLNGVFELCGDNTDFYGKQLESAAEKYEKELLPPFFSTLKKYVE
MGNSTFACPGHQGGQFFRKHPAGRQFFDFYGETIFRSDMCNADVKLGDLLIHEGAPCDAQ
KHAAKVFNADKTYFVLNGTSASNKVATNALLARGDLVLFDRNNHKSNHHGALIQAGATPV
YLETARNPFGFIGGIDAHCFEEKYLREQIRSVAPDRANEARPFRLAIIQLGTYDGTIYNA
RQVVDKIGHLCDYILFDSAWVGYEQFIPMMKDCSPLLLELNENDPGIIVTQSVHKQQAGF
SQTSQIHKKDKHIKGQDRYCNHKRFNNAFMLHASTSPFYPLFAALDVNAKMHEGKSGQRM
WLDCVKTGIEARKMILNTCNMIKPFVPVEVDGKPWQQYDTEAMAQDLRFFNFIPGEKWHA
FEGYEESQYFVDPCKLLLTTPGIDTNTGEYTASGIPATILANFLRENGIVPEKCDLNSIL
FLLTPAEDLAKMQHLVAQIARFERFIEEDAMLIDVLPTVYRNNETRYQGYTIGKLCQEMH
DLYVSYDVKQLQKEMFRKQYFPKVMMNPQDANIEFVRGHAELVPLCKAEGRIAAEGALPY
PPGVLCVVPGEVWGGAAQRYFLALEESINLLPGFAPELQGVYLQVDEDGWNRAYGYMMKQ
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaattaaatatcgcggcaagtttatctgctatgccttgctttgaatcacagcgt
gaagtcgtagatgttttacacactgattttactgatattgccgccgtcgtgctttcagtt
caggacattaataatggtgtcattgaaagcattcatgagttaggtttagagattccaatt
tttgccgctgtttgctgtgaagaagaattgaacaccgatgtattaccctctttaaacggg
gtatttgaactgtgtggcgacaacactgatttttatggtaaacaacttgaatcagctgca
gaaaaatatgagaaagagctgttaccaccgttctttagcacattaaaaaaatacgtggag
atgggtaattctacctttgcttgccctggtcatcagggtggtcaattcttccgtaaacac
ccagcgggccgccaattttttgacttctacggcgaaactattttccgctctgatatgtgt
aatgccgacgttaaattaggtgatttgcttattcatgaaggcgcaccttgtgatgctcaa
aaacatgcagcgaaagtatttaacgcagataaaacctatttcgtactgaatggcacttct
gcttctaataaagtcgcgactaatgcgctattagcgcgtggtgatctggtgctgtttgac
cgtaataaccataaatccaaccatcatggtgcgctgattcaggccggtgcaacaccggta
tatctggaaactgcccgtaacccatttggctttattggtggtattgatgcccactgtttt
gaagaaaaatacctgcgggaacaaatccgtagcgtagcacctgatcgtgctaatgaagcg
cgcccgttccgtctggctatcatccaactgggtacttatgacggcaccatctataacgct
cgtcaggttgtggataaaattggccacctttgtgactacattctgttcgactctgcttgg
gttggttacgaacaatttattccaatgatgaaagattgttcaccattattgcttgaactg
aatgaaaacgatccgggtattatcgttactcaatcagtacataaacaacaagctggtttc
tcacaaacttcgcagattcataaaaaagataaacatattaaaggccaggatcgttactgc
aatcataaacgctttaataacgcctttatgttgcatgcctccaccagcccattctatcca
ttgtttgccgctttagatgttaacgcaaaaatgcatgaaggcaaaagtggtcaacgcatg
tggctcgattgtgttaagaccggtattgaagcacgtaaaatgatcttgaatacctgtaat
atgattaaaccttttgtaccggtagaagttgatggtaaaccatggcagcaatatgacacc
gaggccatggcacaagatttacgcttctttaattttattcctggcgaaaaatggcatgca
tttgaaggctatgaagagtcacaatattttgttgacccatgcaaactattattaaccact
ccagggattgatacgaatactggcgaatatactgcatcagggatcccggcgaccattctt
gctaacttcctgcgcgaaaatggtatcgtgccagaaaaatgtgaccttaactcgatccta
ttcttattaacgccagcagaagatttggcgaaaatgcagcacctggtcgcacagattgcc
cgatttgaacgtttcatcgaagaagatgcaatgttaatcgatgtattacctactgtgtat
cgcaataatgaaacacgttatcaaggttatactattggcaaattatgtcaggaaatgcat
gacctttatgtcagctatgatgttaaacagctacaaaaagaaatgttccgtaaacagtat
ttccctaaagtgatgatgaatccgcaagatgccaatattgaattcgtccgtggtcatgca
gaattagttccattgtgtaaagccgaaggccgaattgctgctgaaggtgcacttccttac
ccaccgggagtattgtgtgtggtccctggtgaagtttggggtggcgctgcacagcgttat
ttcctggcattagaagaaagtattaatttactaccagggtttgcacctgagttacaaggt
gtttatttacaagtcgacgaagatggttggaaccgtgcatacggttatatgatgaagcaa
taa
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