Yersinia intermedia: CH53_1277
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Entry
CH53_1277 CDS
T03608
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
yin
Yersinia intermedia
Brite
KEGG Orthology (KO) [BR:
yin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
yin03016
]
CH53_1277 (truB)
Enzymes [BR:
yin01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CH53_1277 (truB)
Transfer RNA biogenesis [BR:
yin03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CH53_1277 (truB)
Prokaryotic type
CH53_1277 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
CATSPERG_beta-prop
Motif
Other DBs
NCBI-ProteinID:
AJJ17507
LinkDB
All DBs
Position
complement(1465775..1466728)
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AA seq
317 aa
AA seq
DB search
MGRPRRRGRDINGVLLLDKPLGLSSNDVLQKVKRLFSANRAGHTGALDPLATGMLPICLG
EATKFSQFLLDSDKRYRVVARLGQRTDTSDAEGALISEREVNVTQAQMDAALDRFRGDSQ
QIPSMYSALKHQGKPLYEYARQGIEVEREARSITVYELQFIRWEGNDLELEIHCSKGTYI
RTIIDDLGELLGCGAHVSYLRRLQVATYPSDRMVTLEQLTAMVEAAQAEERSPNPELDLL
LLPMDSAVLNFPEVNLLPAVAAYVKQGQPVHVAGAPSEGMVRITEGEEHNFIGIGTIAED
GRVAPKRLVVEAQENAL
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggggcgtccacgtcgtcgcggccgtgacattaacggcgttctgttattggataagccg
ctgggcctctcctctaatgacgttttgcagaaagtaaaacgtctctttagtgctaatcgt
gcaggtcataccggtgcactcgatccactggcgaccggcatgctgcctatctgtcttggg
gaagcgaccaaattttctcaattcttgctggattctgataagcgctatcgtgtggttgcc
cgtttggggcagcgcaccgatacttcggatgccgaaggcgcgttaatcagtgagcgtgaa
gttaacgtcactcaggcacagatggatgccgctttggaccgttttcgcggcgatagccag
cagataccgtccatgtattcggcactgaaacatcaaggtaagccgttgtatgaatatgcc
cggcaggggattgaagtagagcgcgaagcccgtagcattaccgtgtatgaattgcagttt
atccgctgggaaggcaatgaccttgagctagaaatccattgctcaaaaggtacctacatt
cgcactatcatcgatgatttgggtgaattattaggttgcggtgcacatgttagttatctg
cgtcgtttgcaagtggctacttacccaagtgatcgcatggtgactttagagcagttgact
gccatggttgaagcggcacaggcagaagaacgttcgccaaatccagagctggatttactg
ttgctaccgatggacagtgcagtattaaacttccctgaagtcaatctattacctgctgtc
gcagcctatgtaaagcaagggcaaccggtacatgttgctggcgcaccaagcgaaggtatg
gtccgtatcactgaaggcgaagagcataatttcattggtatcggcactatcgcagaggat
ggacgtgttgcacccaaacgcctggtagtagaggcgcaggaaaatgcactgtag
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