Yersinia intermedia: CH53_1301
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Entry
CH53_1301 CDS
T03608
Name
(GenBank) winged helix-turn-helix DNA-binding family protein
KO
K07724
Ner family transcriptional regulator
Organism
yin
Yersinia intermedia
Brite
KEGG Orthology (KO) [BR:
yin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
yin03000
]
CH53_1301
Transcription factors [BR:
yin03000
]
Prokaryotic type
Helix-turn-helix
Other families
CH53_1301
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_35
HTH_3
YL1_C
HTH_20
HTH_IclR
HTH_26
HTH_38
HTH_24
WHD_DprA
Motif
Other DBs
NCBI-ProteinID:
AJJ21173
UniProt:
A0A0T9M038
LinkDB
All DBs
Position
1487665..1487940
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AA seq
91 aa
AA seq
DB search
MILRKSDWHPADIIAALRKKGTTLAALSRKAGLSSSTLANALTRPWPKGEWLIAECLDIH
PSEIWPTRYFDPKTGVLIDRKVRIRPAIVRA
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgattttaagaaaatctgattggcacccagcagacatcattgccgccctacgtaaaaaa
ggcacaacgttagccgctctctcccgtaaagcagggttaagttcatctacacttgccaat
gcgttaactcgtccctggccaaagggggaatggttgattgccgaatgtttggacattcat
ccttccgaaatctggccgacacgttattttgatccaaagacaggggtacttattgaccga
aaagtgaggatacgcccagctattgttcgggcataa
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