KEGG   Yersinia intermedia: CH53_1413
Entry
CH53_1413         CDS       T03608                                 
Name
(GenBank) type III secretion, HrcV family protein
  KO
K03230  type III secretion protein V
Organism
yin  Yersinia intermedia
Pathway
yin03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:yin00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    CH53_1413
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:yin02044]
    CH53_1413
Secretion system [BR:yin02044]
 Type III secretion system
  Type III secretion core apparatus
   CH53_1413
SSDB
Motif
Pfam: FHIPEP Phage_TAC_11 NCC-H
Other DBs
NCBI-ProteinID: AJJ19942
LinkDB
Position
complement(1614200..1616248)
AA seq 682 aa
MRQSALIRGLLMITARQDIFLAIMLLVAIFMMILPLPTVLVDLLIAINLAFSVILLMISI
YLRDPLEFSVFPSLLLITTLYRLALTISTTRLVLLQHDAGEIVEAFGQFVVGGNLAVGLI
IFTIITVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGVIDAAEAGRLRERV
QKESRLFGAMDGAMKFVKGDAIAGIIVILVNIIGGITIGVLQHNMSAEQAMITYAVLSVG
DGLCAQIPSLLISITAGIIVTRVPGGDKQSLAKDLAVQVGRQPDALWLAAAILTVFALLP
GFPFLIFIILAALVAAPAFLLYRKNQSIRHRGTVTGASDSGLSADNSMTPGAVPLMLHCA
TNLDYPELVRDIDSLRWRWFEHLGVPLPEVVVRSDPILIENSLSIRVYQEQVLELTLPSD
ELLLTQPSAQLETRSQRLGSRMGTFEWLAAEQGSHASILGIPYAQGHKRIISCLTRVFER
HTAEFIGVQETRYLMDAMEGRYGELVKELQRQMPLGKVAEILQRLVEEDVSIRDLRAIFG
ALVVWAPKEKDSVMLTEYVRIALRRHVCRRFSKNNLWLPVLRLGEGAENLIRESIRQTSA
GAYSALADKHSRLILDKIKTAVAQNSDVVLLTAIDVRRFLRKIVERDIFTLPVLSWQELG
DEMNIKVAGTIELIGDELDEAA
NT seq 2049 nt   +upstreamnt  +downstreamnt
atgaggcaatcggcattgatccgtggcttgctgatgataactgcgcggcaggatattttt
ctggcgatcatgttgttggtagccatctttatgatgatcctgccgctgccaaccgtgctg
gtggatctgctgattgcgatcaatttggctttctcggtcatcctgctcatgatctcgatt
tacctgcgcgatccgctcgaattctcggttttcccgtcgttattgctgattaccacactt
tatcgcttggcgttgactatcagtactacgcgcttagtgctgctccagcatgatgccggt
gagattgtcgaggcattcggtcagtttgtggttggcggtaatctggctgtggggttgatc
atttttactattatcaccgtggtccagtttatcgtgattaccaaaggctcagagcgagtg
gcagaggtcagcgcccgtttctcgcttgatggcatgcccggtaaacaaatgagtattgat
ggtgatatgcgggcgggcgtgatcgatgctgccgaggccgggcggctaagggagagggtg
caaaaagagagccggttgtttggggcgatggacggcgcgatgaagttcgttaaaggcgat
gctattgccgggattattgtcattctggtgaatattattggtggtatcaccatcggggtg
ctgcaacataatatgtcggcggaacaggcgatgatcacctatgcagtgctctctgttggc
gatgggctatgtgcccaaatcccatcgttacttatctccattaccgctgggattatcgtg
acccgcgttcctggcggcgataaacagagtctggctaaagatctggcggtacaagtgggg
cgtcagccagatgctttatggttagccgccgccatcctgactgtttttgctttgttaccc
ggttttccattcctgatttttatcatactggcggcactggtggctgcgccggcgttttta
ctctatcgcaagaatcagtcaatacgacacagaggtacggtaacgggggccagtgatagc
ggcttgtctgcggataattcgatgacaccaggagcggtacccttgatgttgcattgcgcg
accaacctggattatcccgaattggtccgagatatcgatagcttgcgttggcgctggttt
gagcatcttggcgtgccattaccggaggtggttgtccgcagtgatcctatcttgattgag
aacagcttatcgatccgggtctatcaggagcaagtgctggaactgacattgccatcagat
gagttgctactgactcagcccagtgcccagctagagacgcgcagccaaaggttaggcagc
agaatgggcacttttgagtggttagccgcagagcagggcagccatgccagcatcttgggt
atcccatatgcacaaggacataaacgtattatctcttgcctgacacgggtatttgagcga
catacggctgaatttattggtgtgcaggaaacccgttatctgatggatgcgatggaaggg
cgttacggggaattagtgaaagaactacagcgccagatgccgctgggcaaagtcgcggag
atactgcaacggctagtggaggaggatgtgtcgatccgggatttgcgggccattttcggc
gcgctggtggtctgggcaccgaaagagaaagacagtgtcatgttaaccgagtacgtgcgc
atcgccttacgccgccatgtgtgtcgccggttcagtaaaaataacctctggttaccggta
ctgcggctgggggagggggctgagaacttgatccgcgaatccattcgccaaacctctgcg
ggggcttactcggcgttagccgataaacactcacgcctgatcctcgacaagataaaaacc
gccgttgcacaaaacagtgatgttgtcttgctgaccgccatcgatgtacgccgttttctg
cgcaaaatagttgagcgggatattttcacgctgccggtactttcctggcaggaattgggg
gatgagatgaatatcaaggtggcaggcactattgagttgattggtgatgaacttgatgaa
gctgcctga

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