KEGG   Yersinia intermedia: CH53_1433
Entry
CH53_1433         CDS       T03608                                 
Name
(GenBank) type III secretion apparatus protein, YscD/HrpQ family
  KO
K03220  type III secretion protein D
Organism
yin  Yersinia intermedia
Brite
KEGG Orthology (KO) [BR:yin00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:yin02044]
    CH53_1433
Secretion system [BR:yin02044]
 Type III secretion system
  Type III secretion core apparatus
   CH53_1433
SSDB
Motif
Pfam: Yop-YscD_ppl_2nd Yop-YscD_ppl_3rd Yop-YscD_ppl_1st Yop-YscD_cpl Y4YQ_C
Other DBs
NCBI-ProteinID: AJJ17512
LinkDB
Position
complement(1627012..1628226)
AA seq 404 aa
MAVRFKLRLLNGELSGRELMLPEGVFTLGGQQCDVLLPLPQGQILTLRISDEHITLQTSG
DVWIKGERHDLQKKLPLRQTIETAGLILVIGEAEDILSDIHYIPRARPRLLLWLSVLAFI
LLLMLSAVIFWFIQQPKALLAYLPPDIPTQLSEQLKQPALQGVKENWLSDGSVILSGHCR
SSPAVIKLQNFLVLNRVIFRNQLVCDDHLLSSVKDVLHQYGYQDMEVDTGKYPGHITIHG
AIEMGGQWLKVQETLATVAGLKGWAVINSHDGQIAQLVERLRELGLLGYLSMAQSNKEII
ISGILSLSQQQQLMDMLTALARQQPGFLAVKYQNIPTSDQTAQFLPAAIVSYGGNKLSGF
VQLANGLRLQQGAVLANGYKVIFIGEQGISLLKSNNLIHIPMNF
NT seq 1215 nt   +upstreamnt  +downstreamnt
atggcagtacggtttaaactccgcctgttaaatggtgagcttagtgggcgtgagctgatg
ttacctgagggggtgtttacattaggggggcagcagtgcgacgtattattgcccttacct
cagggacaaatattaaccctgagaataagtgatgagcacataaccttgcagacgtctggg
gatgtttggattaagggggaacggcatgatttacaaaagaaactccctctcagacagacg
attgaaactgcgggattaatcttggttattggcgaggcagaggatattttaagtgatatt
cattatatccctcgcgctcggccacgcttattactctggttatctgtactggcatttatc
ctgttgttaatgctatcggcagttatattctggtttatacaacagccaaaagcgctactg
gcttatcttcctcctgatattccaacacaactctcggagcagttaaagcaacccgcttta
cagggggtaaaagaaaactggttatcagatggcagtgttattttgagtggtcactgtcgc
tcatcacccgcagtgattaagttgcagaatttcctggttcttaaccgtgttatctttcgc
aatcaattagtttgcgatgaccatctgctcagtagcgtcaaggatgtattacaccagtat
ggctatcaggatatggaggtcgacacggggaaatatccagggcatatcacaatccatggt
gctattgaaatgggtgggcaatggttgaaagttcaggaaacactggcgacagtggctggg
ttaaagggctgggcggttattaatagccatgatgggcaaattgcgcaattagttgagcgc
ttaagggaattggggttattaggttatctcagtatggcgcaaagcaataaggaaataatt
atcagcggtatattgtcgctcagccaacaacaacaactgatggatatgttaacagcattg
gcccggcagcaaccgggctttctggcggtgaaatatcagaatatccccacgtcagatcaa
accgctcagtttcttcctgctgcaatcgtcagctatggtggaaataaactttcaggattc
gtgcaactagctaatggtttacgcttacagcaaggggcggtactggcgaatggctataaa
gttatttttattggagagcaaggcatatcattactaaaatctaacaatttaatccatata
cccatgaacttttaa

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