Yersinia intermedia: CH53_1456
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Entry
CH53_1456 CDS
T03608
Symbol
rsmB
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
yin
Yersinia intermedia
Brite
KEGG Orthology (KO) [BR:
yin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
yin03009
]
CH53_1456 (rsmB)
Enzymes [BR:
yin01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
CH53_1456 (rsmB)
Ribosome biogenesis [BR:
yin03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
CH53_1456 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
NusB
Methyltransf_31
FtsJ
Methyltransf_25
Methyltransf_37
MTS
Methyltransf_5
Methyltransf_24
Cons_hypoth95
Methyltransf_4
Methyltransf_12
Methyltransf_33
Methyltransf_11
TRM5-TYW2_MTfase
Methyltransf_15
Ubie_methyltran
Motif
Other DBs
NCBI-ProteinID:
AJJ18151
LinkDB
All DBs
Position
1653349..1654638
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AA seq
429 aa
AA seq
DB search
MKNTYNLRSIAAKAISQVLDQGQSLSTVLPGLQKNISDKDRALLQELCFGTLRVLPQLEW
CIQQLMARPMTGKQRIFHYLIMIGLYQLVYTRIPPHAALAETVEGATALKRPQLKGLING
VLRQFQRQQVELLERAANSDSRYLHPSWLLARIKQAYPDQWQQIVDANNQKPPMWLRVSR
LHHTRGEYLDLLKEAGIDAEPHAYYPDAVRLIAPCAVSDLPGFELGWVTVQDASAQGCVD
LLDPQNGEQILDLCAAPGGKTTHILEAAPKAHVLAVDIDEQRLSRVNENLQRLKLHAVVR
VGDGRTPETWCGDQQFDRILLDAPCSATGVIRRHPDIKWLRRDSDIADLAALQSEIIEAI
WPRLKKGGVMVYATCSILPEENQQQIAAFLQRHSDAELVETGTNTAPGKQNLPHPEDGDG
FFYAKLFKR
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacacatataatctccgcagcatcgctgctaaagcaattagccaggtattggat
caggggcaatcgctcagtactgttttgcctgggctacagaaaaatatttccgataaagat
cgcgcattgctgcaggagttgtgttttggcactttgcgtgttctgccacaactcgagtgg
tgcatccagcagttgatggcgcgcccgatgaccggtaaacagcgtatttttcactatctg
attatgatcggactgtatcagttggtttatacccgtattcctccacatgctgctttggcc
gaaacggttgaaggtgctactgcactaaaacgcccgcagctaaaagggttgatcaatggg
gtactacgccaattccagcgccagcaagtggaattactggagcgcgcggcaaatagcgat
agtcgctacctgcatcctagttggttattagcgcgtattaagcaggcctatccagaccaa
tggcagcaaattgtggacgcgaataaccaaaaaccaccaatgtggctgcgggttagtcgt
ctccatcatacccgtggtgaatatctcgacctgttaaaagaagcaggaatagatgccgaa
cctcatgcctattatcccgatgcagtaaggcttattgccccttgtgccgttagtgatctg
cctggtttcgaactaggctgggtaacagtacaagatgcctcagcccaaggctgtgttgat
ctgcttgatccgcaaaatggtgaacagatccttgatttatgtgccgctccgggtggtaaa
acaacccacatcctcgaagcggctccaaaagcacatgtattggctgttgatattgatgaa
caacggctgagtcgggtcaatgagaatttacaacgcctgaaattacatgctgtagtgcga
gtcggcgacggtcgtacccctgaaacatggtgtggtgatcagcaatttgatcgcattctg
ctagatgctccctgctctgcaactggtgtgattcgccgccaccccgatatcaaatggttg
cgccgcgacagtgatattgcagacctggcagcattacaatctgagatcattgaagctatc
tggcctagactgaagaaaggcggcgtaatggtttatgccacctgttcgatattaccagaa
gaaaatcagcagcagatagctgctttcctacaacgacatagtgacgcagaattagttgaa
actgggactaacaccgcgcccggtaaacaaaacttgccacaccctgaggatggcgatggt
ttcttttatgcgaagttgttcaaaagataa
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