Yersinia intermedia: CH53_1525
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Entry
CH53_1525 CDS
T03608
Name
(GenBank) ftsK/SpoIIIE family protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
yin
Yersinia intermedia
Brite
KEGG Orthology (KO) [BR:
yin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yin03400
]
CH53_1525
DNA repair and recombination proteins [BR:
yin03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
CH53_1525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
ResIII
AAA_10
T2SSE
TrwB_AAD_bind
FtsK_SpoIIIE
SLFN-g3_helicase
AAA_16
AAA_30
AAA_19
Hydrolase
AAA_7
AAA_25
DEAD
SRP54
CbiA
AAA_28
P-loop_TraG
AAA_11
AAA_6
Motif
Other DBs
NCBI-ProteinID:
AJJ19147
LinkDB
All DBs
Position
complement(1702268..1703791)
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AA seq
507 aa
AA seq
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MSETLLIAKVPPAQDLVILSALANRHGLITGATGTGKTVTLQKMAEQFSRIGVPVFLADV
KGDLSGIGAEGVDSEKLQTRLAAIGVADWQPQACPIVPWDIFAEKGHPIRATISDLGPLL
LGRLLDLNDVQSGVLQLVFKIADDNNLLLLDMKDLRAIVQYVGDNAKQFRTQYGNITPAS
IGAIQRGLLTLEEQGANQFFGEPMLDIHDLMQLDSHGQGVINLLAADRLINQPKLYAIFL
LWLLAELFEQLPEVGDVDKPKLVFFFDEAHLLFSDAPTALVDKVEQVVRLIRSKGVGIYF
VTQNPLDIPDKILGQLGNRVQHALRAFTPRDQKAVKAAAQTMRANPAFSAEQVITELGVG
EALISFLDEKGRPNVVERGMVIAPQSKMGALDAAARNHAINHSPLYGRYEESVDRESAYE
KLSAGGFSTMGDAAAGGGAASQPSTDQQGSAGGGLMDGLNDLLFGSTGPRGGKRDGIVQT
AAKSMARDLGRQILRGVLGSITGGRKR
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaacattgcttatcgcgaaggtaccgccagcacaggatttagtgattttatcg
gctctggctaaccgtcatggcctgattaccggcgcaaccggtaccggtaaaacagtcacc
ctgcaaaaaatggctgagcaattttcccgtattggtgtgccggtatttctcgccgatgta
aaaggggatttatctggcattggggcggaaggggttgattcggaaaaactccaaacccgg
ctggcggcgataggtgttgcggattggcaaccacaagcttgcccgattgtgccgtgggat
atcttcgctgaaaagggccatccgatccgtgccactatttccgatcttggcccgctgctg
ctggggcgtctgcttgatctgaatgatgtgcaaagtggtgtgttgcaactggtattcaaa
attgccgatgacaacaatctgctgctgcttgatatgaaagatttacgggctatcgtgcaa
tatgttggcgacaacgcgaaacagttccgtacgcaatacggcaacatcacgccagcctca
attggtgctatccagcgtggtttactgacgttggaagagcaaggtgccaatcaattcttt
ggcgagccgatgctggatattcacgatttaatgcaactcgacagccatgggcagggagtt
atcaatctgttagcggctgatcggttaattaatcagcccaaactgtatgctatttttctg
ttgtggttgctggctgaacttttcgagcaacttcctgaagtgggtgatgttgataagcct
aaactggtgtttttctttgacgaagcccatctgctgttcagtgatgcgccaacggcgctg
gtggataaagttgaacaggtggtccggctgattcgctcaaaaggggttggcatctatttt
gtgacacaaaatccattggatatccccgataaaatccttggtcaactgggcaaccgggta
cagcatgccctgcgcgcctttaccccacgggatcaaaaagcggttaaggctgctgctcag
actatgcgtgcgaatccggcatttagcgccgaacaggtgattaccgaactgggggttggc
gaggcgctcatctctttccttgatgagaaagggcggcccaatgtggtcgaacggggtatg
gttatcgcgccacaatcaaaaatgggcgcattggatgcggcggcacgtaatcacgccatc
aatcattccccactgtatggccgttatgaagagagtgtggatcgtgagtctgcctatgag
aaattatctgcgggcggattctccaccatgggggatgcagcggccggagggggggcggct
tctcagccgtcaaccgatcagcagggtagtgctggcggtggcttgatggatgggctgaat
gatttactgtttggctctaccggcccgcgcggtggcaaacgtgatggtatcgtccagacc
gcagccaagagtatggcgcgggacttggggcgacaaattttgcgcggtgttctggggtca
attaccggtgggcgtaagcgttaa
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