Yersinia intermedia: CH53_1529
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Entry
CH53_1529 CDS
T03608
Name
(GenBank) TonB-dependent copper receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
yin
Yersinia intermedia
Brite
KEGG Orthology (KO) [BR:
yin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
yin02000
]
CH53_1529
Transporters [BR:
yin02000
]
Other transporters
Pores ion channels [TC:
1
]
CH53_1529
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
AJJ18004
LinkDB
All DBs
Position
complement(1707619..1709661)
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AA seq
680 aa
AA seq
DB search
MSGKNKTYKKTLLACAVTSAFSVFALNTFAATHDHLMAHDPVVNNTINDSSDKKLNDADV
ITVTAPLHSPLVIVTSPKAPRQPVPASDGADYLKTIPGFSQIRNGGTNGDVVFRGMFGSR
IKILTDGAETLGACPSRMDAPTSYISPESFDLLTVVKGPQSVLWGAGASAGTILFERQPP
HFEQAGIKGNASLLVGSNGRWDKNLDASLGNEQGYLRMMGNQSQAGDYKDGNGTRVPSKW
DKWNADIAVGWTPDSDTLLELTAGKGDGEARYAGRGMDGSQFLRESLGARFEKTNIGEVL
DKIEAKIYYNYANHIMDNNTLRTPPMMAMSSNVDRRTMGGRVMGTWLWQDLKLEAGTDLQ
TNTHRKNKQGHWDKDARFTSNGLFSELTWSASDQDKLITGARIDHHEVTNYVRANEPTRS
ATLPAGFMRFEHNLTDLPVMWYAGLGHTERFPDYWELFSPTFGPVGSTSAFEGVKSEKTT
QLDIGAQYNGKQLNSWVSAYLGRVNDFILFKYDPNNLRISQADNIDATIMGGEMGAGYAF
NDNWKADASLAYAWGKNTSNHRPLPQIPPLEARLGLTFETGDWSSTALWRLVSSQHRVAI
NEGNVVGKDFADSAGFGVLSANVAYKVTKQVKVSAGIDNLLNKAYSEHLNLAGNSGFGYS
ANTSLNEPGRTLWAKLNVTF
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcaagaataaaacctataaaaaaacattattagcatgcgcagtaacctctgcc
ttttctgtctttgctttaaatacctttgccgccacgcatgaccatctgatggctcatgat
ccggtggtgaataacaccatcaacgatagcagtgataaaaagctcaatgatgctgatgtc
ataaccgttactgcgccccttcattcgccactggttatcgtgacctcgcctaaagcaccg
cgtcaacccgttcccgccagtgatggagctgactatctgaaaactatccccggtttctcg
caaatccgtaatgggggtaccaatggggatgtggtgttccgtggcatgtttggctcgcgc
ataaagattctgacggatggtgcagaaacactgggtgcctgcccatcaaggatggacgcg
cccacatcctatatttcaccagagagctttgacctgctgaccgttgtgaaggggccacaa
tcggtgctgtggggagcaggtgcttccgccggtactattttgtttgagcggcaacctcct
cactttgaacaggcgggcattaaagggaatgccagtctattggtgggttctaacggtcgc
tgggataaaaatctcgatgccagtttaggtaacgagcaaggctatttgcgcatgatgggc
aaccagtctcaggcgggtgattacaaagatggcaatggcacgcgggtgccctcgaaatgg
gataaatggaatgccgatatcgccgtgggttggacgccagatagcgatacgttacttgag
ctaacagcgggtaaaggtgacggtgaagcaaggtatgccgggcgcggtatggacggttcc
cagttcttgcgcgagagcctgggtgcccgttttgaaaaaacaaatatcggtgaggtgttg
gacaaaattgaagccaaaatctactacaactatgccaatcatattatggataacaataca
ttacgcacgccaccgatgatggcgatgtccagtaatgtagaccggcgcacgatgggtggg
cgggtcatgggcacctggttgtggcaggatctgaaattggaggcgggtactgatttgcaa
accaatacgcaccgtaaaaacaaacaaggccattgggataaagatgcccgctttactagc
aacggtttgttcagcgaactgacctggagtgccagcgatcaggataagttgattaccggt
gcccgtattgatcatcatgaggtcaccaattatgtccgcgctaatgagccgacacgctct
gcaacgctccccgccggtttcatgcgttttgagcataatctgactgacttacccgtgatg
tggtacgccggtttgggccatacagagcgttttcctgattattgggagctattttcaccg
acgttcgggcctgttggctctaccagcgcttttgagggggtgaagagtgaaaagaccact
cagcttgatattggtgcgcaatacaatggtaagcagctaaacagttgggtttcagcttat
cttggtcgggttaatgatttcatcttgttcaagtatgaccctaacaatctgcgcatcagc
caggcagataatatcgacgcaactatcatgggcggtgagatgggggcagggtacgccttt
aacgacaattggaaagctgacgccagcctggcttatgcctgggggaaaaataccagtaat
catcgtccgttgccgcaaatccctccccttgaagcacggttaggattgacgtttgaaaca
ggggactggagtagcaccgcattatggcggttagtcagcagtcagcaccgggttgcgatt
aacgaagggaatgtggtgggcaaagactttgctgatagcgcgggtttcggtgtgctgtct
gccaatgtggcttacaaggttacaaaacaagtcaaagtcagcgctggtatcgataatctg
ctgaataaagcgtacagcgagcacctgaatctggctggtaatagtggatttggatactca
gccaatacgtcgttgaatgagccgggccggactctttgggcaaagttgaatgtgacattt
taa
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