Yersinia intermedia: CH53_1625
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Entry
CH53_1625 CDS
T03608
Symbol
pelY
Name
(GenBank) periplasmic pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
yin
Yersinia intermedia
Pathway
yin00040
Pentose and glucuronate interconversions
yin01100
Metabolic pathways
yin02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
yin00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CH53_1625 (pelY)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CH53_1625 (pelY)
Enzymes [BR:
yin01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
CH53_1625 (pelY)
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Motif
Pfam:
Pectate_lyase_2
Motif
Other DBs
NCBI-ProteinID:
AJJ21333
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Position
complement(1830636..1832354)
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AA seq
572 aa
AA seq
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MKKRALFLSMAALATLYIPAGQAADTDRLTVVKQYVDNVLSKASDTYHGDKPSPLLADGV
DPRTGQQMEWIFPDGRRAVLSNFSAQQNLMRVMSGLSQLTNDARYQKRAEDIVRYHFQNY
QDPSGLLYWGGHRFVDLKTLQPEGPSEKERVHELKNAYPYYDLMFSVDSDATARFIRGFW
NAHVYDWRILETSRHGEYGKPMGALWESKFEQQPPFFATKGLSFLNAGNDLIYSASLLYK
HQQEPGALVWAKRLASQYVLPRDAKTGLGVYQFTQALKREEPTDDADTHSKFGDRAQRQF
GPEFGPAALEGNMMLKGRTSTLYSENALMQLQLGKDLGNQGQDLLKWTVDGLKAFAQYAY
NDKDNTFRPMIADGQDLSNYTLPRDGYYGKKGTVLKPYKAGNEFLISYARAYAIDNDPLL
WKVARGIANDQGLGDLGTAPGKEVKIKLDTTNSDPYALFALLDLYHGSQVEDYRLLAEKI
GDNIIKTRYIDGFFMASPDRQYADIDAIEPYALLALEASLRNKPQAVPPFLNGAGFTEGA
YRMDDGSARISTRDNELFLLNVGEKLQPNGRK
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaagagcgttattcttgagtatggcagcactggcaacgctgtatatacccgcc
ggacaggctgcggatactgatcgtctcactgttgtgaaacagtatgtcgataacgtgtta
agcaaggcttcagatacttaccacggcgataagcccagcccgttgttggcggatggtgtt
gacccccgtactggccagcagatggaatggatcttccccgatggccgtcgggctgtgtta
tcaaacttctcagcacaacaaaatctgatgcgtgtcatgagcggcttgagccagcttacc
aatgatgcccgttatcaaaagcgagctgaagatatcgttcgctatcatttccagaattat
caagatccgagcggtttactctattggggcggtcatcgctttgttgacctgaaaacgctg
caaccagaaggaccgagtgaaaaagagagggtgcatgaactgaaaaatgcctatccctac
tatgatttgatgttcagtgttgatagtgatgcaactgcccgctttattcgtggtttctgg
aatgcccatgtctatgactggcgtatcctcgaaaccagccgccatggcgaatatggcaag
ccaatgggggccttgtgggaaagtaaattcgagcagcaaccgccattctttgccaccaaa
ggtcttagcttcctcaatgcgggcaatgatctgatctattccgcttccctgctttataaa
catcagcaagagccaggagcattagtgtgggctaagcgtttagcctcgcagtatgtatta
ccacgtgatgcaaaaactggccttggtgtttatcagtttacccaagcactcaaacgggaa
gaaccaacggatgacgccgatacccactccaagttcggtgaccgcgcacagcgtcagttt
ggtcctgagtttggcccagcagccttggaaggcaatatgatgctcaaagggcgcaccagt
acgctttactctgaaaatgcgctgatgcagttgcaattgggtaaagacctgggcaatcaa
gggcaagatttattgaaatggaccgtggatggtctcaaagcattcgcgcaatatgcttat
aacgataaggacaacaccttccgcccaatgattgccgatgggcaagatttgtccaattat
acactgccgcgtgatggctattatggcaaaaaaggtaccgtgctcaagccgtacaaagcg
ggcaacgaattcctgatttcatatgcccgtgcttatgctatcgataatgatccattgttg
tggaaagtggctcgcggtattgcaaacgatcaggggctaggtgatcttggcaccgcacca
ggtaaagaggtgaagatcaagttggatactaccaacagcgatccatacgctttgtttgct
ttattagatctctaccatggcagtcaggtggaagactatcggttattagcagagaaaatc
ggcgataacatcattaaaacccgctatatcgacggcttctttatggcgtcaccagatcgt
caatatgcagatatagatgccattgagccttacgctttattggcactagaggcttcatta
cgcaataaaccacaggcagtcccccctttcctgaatggtgctggttttactgaaggcgct
taccgaatggacgacggttcggcccggatctcaacccgtgataatgaactgttcttgctc
aatgtgggtgagaagctgcaaccgaacggccgtaaatag
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