Yersinia intermedia: CH53_1632
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Entry
CH53_1632 CDS
T03608
Name
(GenBank) tetratricopeptide repeat family protein
KO
K20543
cellulose synthase operon protein C
Organism
yin
Yersinia intermedia
Brite
KEGG Orthology (KO) [BR:
yin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
yin02000
]
CH53_1632
Transporters [BR:
yin02000
]
Other transporters
Pores ion channels [TC:
1
]
CH53_1632
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCSC_C
TPR_19
TPR_16
TPR_14
TPR_2
ARM_TT21_5th
TPR_11
TPR_CcmH_CycH
TPR_12
BTAD
TPR_7
ARM_TT21_2nd
TPR_1
TPR_Slam
TPR_8
TPR_17
HAT_PRP39_C
TPR-S
TPR_20
DUF6584
TPR_9
TPR_4
TPR_6
DUF6439
Motif
Other DBs
NCBI-ProteinID:
AJJ20577
LinkDB
All DBs
Position
complement(1842534..1846016)
Genome browser
AA seq
1160 aa
AA seq
DB search
MRNIKRYWLLSLALLPQAFTGMALGAEPVSPTQFLLEQVRLGEATNRDELVKQSLYRLNM
MDPNNPDVVAASMRQALRQGNLAEAQQQLDKLQQLAPDSDTYQRAKLMLALTKPEVRQQL
QQARLLATAGRIAEAKAQYDQLLQGKPPTLDLAVEYWRLVARVPGQEALATQKLAALDQQ
YPGNVALRMALARLYFSQQNATQGYAMLEKVASDPVGASQAADLWMETIKAMTVSPQSVA
ALTHFLDVFSSGPQANLARQALANQQAMLASPTYQARLNGLAKVDSGGGAAAIPALKQAL
AASPNDPEILGALGLAYARSGDRAQALRLFEQAQKSDKDGLKSDKWISLIKTNRYWLLND
EGDKALKAGNTGVAQQKYQQARHIDGSDSYALIGLADVAVARHDDKTAEQYYQQALRLDP
SNDSAVRGLSNIYQRESPQKALSYLSSLPRSQQAKMRDTLDSLQIDMLKQQAENLAAQQQ
WRQAAEKYRQALKMAPDDVWITYRLAQALAQEDHLAEADAQFHRLASRKPGDPEQVYAYA
LYFSSTGRDSQALAHLVTLPTLQWTDNIRALDQRLKLEQVLAVARQLRASGDEAGAVTVL
RQQPANTGIDLTLADWALERGDYQEALAGYQRIRAREPQNPDAILGEIEAYIAEGRLSDA
HQNLQHKPLSDEGASLNTQRRIANAWRSVGEPQKAADIFQRLKLVAAKGVPSQDNALIFR
DSGRLAQLQGQPAAAQDDFKHAMVASGITPTLPADNDSYTLLTRNQATDDWLKRGVRSDA
ADLYRQQDTRITLDHDYLRSSGTEGISDLRAHNTMLQVDTSLADGRAFFRTDTVQMDAGT
FDKNTRYKAGTCYQTENPCQTNLHQQATGTSVAVGWQNDSWQTDIGTTPMGFDVVDVVGG
LAYSNSWNNIGWTATASRRPISSSMLSFAGAKDPNTNVTWGGVRANGVSLGASYDRGEAN
GVWSDLSYHYLTGKNVADNQRLRFMTGYYYKLINEDNRRVTVGLNGMWWHYQKDLSGYTL
GQGGYYSPQKYLSLAIPVNYRQRTDNWSWELGGSVSVSHSATSSRARYPLQNLLNNSIQP
IPDRYEPDDGGSSNGVGYTLRALIERRLSSHWTLGAGVDIQQAKDYTPSHALIYLRYSMA
GWQGSLDMPPQPLVPYSDFK
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaacattaaaagatactggctcttaagcctggcgctgttgcctcaagcctttacc
ggtatggctctgggcgcggaaccggtctcaccaacccagtttttactggaacaggtacgg
ttaggggaagcgaccaatagagacgaattggttaagcaatcattatatcgcctgaatatg
atggacccaaataaccctgatgtagtggcggcaagtatgcgccaagccctgagacagggt
aatttggccgaagcacaacaacagttggataaactgcaacaactggcacctgattcagat
acttatcagcgagcgaaactgatgttggcgctgactaaaccggaggtgcggcaacagttg
caacaagcacgtctgttggcgactgccgggcggattgctgaggccaaagcgcaatatgat
caattgttgcaaggaaaaccgccgacgctggatcttgctgtggaatactggcggttggtc
gcacgtgttccggggcaggaagccctcgccacccagaagttagccgcacttgatcaacaa
taccccggcaatgtcgcgctgcgaatggccttggcccgcctgtatttcagccagcaaaac
gctacgcaaggctatgccatgttggagaaagtggcctcggaccctgtgggagcttcacaa
gccgcagatttgtggatggaaacaatcaaggcaatgactgttagcccacaaagtgtcgcg
gcactgactcatttcctcgacgtcttctcgtctggccctcaagctaatcttgcccgtcag
gcattggcaaaccagcaggccatgctggcttcaccgacttatcaagcgcgtttaaacgga
ttggcaaaggtagacagcggtggcggggcggcggcgatccctgcgctaaaacaggcactg
gctgcctcacctaatgaccccgaaatactcggcgcgttgggcctggcatatgcccgtagc
ggtgaccgcgcacaagcgctgcgcttgtttgagcaggcgcaaaaatcagataaagatggt
ctgaaaagcgacaagtggatcagcctgataaaaaccaatcgctactggctgctaaatgac
gagggagataaagcgctgaaagcgggtaataccggcgtggcgcaacagaaataccagcag
gcacggcacattgacggcagcgacagctatgcattgattggcttagctgatgttgccgtg
gcccgtcatgatgataaaacagccgaacagtattatcagcaagcgctacgtctggaccca
tcaaacgacagtgcagtgcgtgggttaagtaatatctaccagcgtgaatcgccgcaaaaa
gcattgagttacctgagcagtttgccacgcagtcaacaagccaaaatgcgtgacacatta
gatagcctgcaaatagatatgctgaaacaacaagctgaaaatctggcggcgcagcaacaa
tggcgtcaggcggcagaaaaatatcggcaggcgctaaagatggccccggacgatgtctgg
ataacttatcggctggcacaggcgttagcgcaagaggatcatttggcggaggctgatgcc
cagttccaccggctagcaagccgtaagccgggagatcccgaacaggtatatgcctatgca
ctgtatttctccagcacggggcgtgatagtcaggcattggcgcatttggtaacgctgcca
accctgcaatggactgataatatccgcgctttagaccagcgcttgaaattggaacaggta
ctggccgtggcccgccaactgcgggcaagtggtgatgaagcgggcgcggtaaccgtatta
cgtcagcagccagccaacaccggaattgacctgacgcttgccgattgggcgctggagcgt
ggcgactatcaggaagcactggcgggttatcagcgaattcgggcgcgcgagccacaaaac
cctgatgccatactgggtgagattgaggcttatattgctgaaggccgcctcagtgatgct
catcaaaatttacaacataagccactttccgatgaaggggccagcttgaacactcagcgc
cggatagccaatgcctggcgcagcgtaggggagccacaaaaagcagcagatattttccaa
cgtttgaagctggtggctgccaaaggtgttccttcacaggataatgccttgatattccgt
gactcaggccggttagcccaattacaggggcaacctgctgcggcgcaggatgatttcaaa
catgccatggtagccagtggtatcacacctacgctcccggctgataacgacagttatacc
ttgctgacccgcaatcaggccacggatgactggcttaagcggggtgttcgttctgatgcc
gctgacctttatcgtcagcaggatacccgcatcactctcgatcacgactatctgcggtca
agtggcactgaagggatttcagacctccgtgcgcacaacacgatgttgcaggtcgatacc
tcgttagctgatggtcgggcgttcttcagaacggatacggtgcagatggatgccgggacc
tttgacaagaatacccgatataaagccggtacctgctaccagacagaaaatccatgtcag
actaatctgcatcaacaggcaacgggcaccagtgttgctgtgggttggcaaaatgacagt
tggcaaaccgatatcggtactacgccgatggggtttgacgttgttgatgtggtcggtggg
ctggcatacagcaatagttggaataatattggctggactgccacggcatcacgtcgacca
atatccagctcgatgctgtcttttgccggagccaaagatccgaataccaatgtgacttgg
gggggcgtgcgtgctaacggcgtcagtctgggagccagttacgatcgtggtgaagccaac
ggagtgtggagcgatttaagctatcattatctgactggcaaaaatgtagcagataaccag
cgcctgcgttttatgacaggctattactacaagctaatcaatgaagataaccgccgtgtt
accgtcggtttgaacggtatgtggtggcattatcaaaaagacctcagcggttatacgcta
ggccagggtgggtattacagcccgcaaaagtatttgtcactggctattccggtaaactat
cggcagcggacagataactggtcgtgggagttgggtgggtcggtgtctgtttcacattct
gcaaccagctcacgagcgcgttatccactgcaaaatctgctcaataacagcatccagcct
attccagatcggtatgaacccgatgatggtggcagcagcaatggggtgggttataccttg
cgcgccttgatcgaacgccgtttgagttcgcattggacattgggggccggggtcgatatc
cagcaggcgaaggactataccccaagccatgcgcttatctacctgcgttactctatggct
ggctggcaaggctcactggatatgccaccacagcccttggtgccttactccgatttcaag
tag
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