Yersinia intermedia: CH53_1834
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Entry
CH53_1834 CDS
T03608
Name
(GenBank) diguanylate cyclase domain protein
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
yin
Yersinia intermedia
Pathway
yin02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
yin00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CH53_1834
Enzymes [BR:
yin01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
CH53_1834
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GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_4
RIP
Motif
Other DBs
NCBI-ProteinID:
AJJ21168
UniProt:
A0A0T9MQE2
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Position
complement(2087682..2089676)
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AA seq
664 aa
AA seq
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MFQDQNTSILETYFGTHSPFWRLAFDSQALELSAIKGTTNIAIPLNSVQTMKIRGLTGIT
ASLDIEIEIYGNPLHLHLVGRKVNDKEWGGTASAYADTESVARDLVMGLSFAEQVVSEAN
SVIVILDKDGYVQRFNHLSEEYTGKKEQDVIGKNVYDLFMTAKEGASSRKNIEGFFQRGA
SYEVERWVNTVKGKRLFLFRNKFVHSGSGKNERYLICSGTDITKERRAQERLRILANTDM
ITGLPNRHAIHERINSAILTRGETSVGIIYLDLDNFKKVNDHYGHMFGDRLLKDVSLAIL
SCLGESEMLARLGGDEFIVLVENASMNLLEATAQRILNRMKLPFRVGLIEVYTGCSIGIA
LCPEHGDTLENIIRSADTAMYTAKEHGKQTYSIFSQEMNKKVSEYVWLDTNLRKGLEQHQ
LQVFYQPKISAKTGKVHSVEALVRWLSPERGLIAPLEFISYAEESGLIGPLGKWVLQTSM
QQAVDWKKRGINLRVAVNVSARQLIDEAIVTSFIESLEASELESSLVDVELTESCLIDDE
DSAINIMKQLRHLGAQVHLDDFGTGYSSLSQLARIPIDAIKLDQSFVRDIDNNPISQSLV
KAIIVVAEALKMRVIAEGVETKGEEEFLDSIGIDEKQGFLYAKPMPADELEHWLVTQHPH
LPLD
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgttccaagaccaaaacacatcgatcctagagacctattttggtacccatagccctttt
tggcgactggcttttgatagtcaggctttagagttatccgccatcaagggaaccacaaat
attgccattccccttaattccgttcaaacaatgaaaattcggggtttaacgggtattact
gccagtttagatattgaaatagaaatttacggtaatccacttcatttacatctggtgggc
cgtaaagttaatgacaaagaatggggtggaaccgcctccgcgtacgctgatactgagtcg
gtagcacgcgatttagtgatggggctttcctttgcagaacaagtcgtttctgaagctaac
tctgttattgtgattcttgataaagatggttacgtacagcgattcaatcacctcagcgaa
gaatataccggtaaaaaagaacaagacgttattggtaaaaatgtttacgacttgtttatg
acagccaaagagggagcctcgtcgcgcaaaaatattgagggcttcttccagcgcggtgca
tcttacgaagttgaacgttgggttaatactgtaaaagggaaacgcctctttttattccgc
aataagtttgttcacagtggtagtggcaaaaatgagcgttaccttatctgttctggtact
gatattactaaagaaaggcgtgcacaagagcgtttgcgaattttggctaataccgacatg
attactggcctgcctaatcgccacgctattcacgaacgtattaatagtgcaatcctaact
cgtggtgagacttcagtcggcattatttacctcgatctcgataattttaaaaaagttaac
gaccattacggccatatgtttggtgatcgcttactcaaagatgtctcgctggccatttta
agttgtttgggtgaaagtgaaatgcttgcccggttaggcggtgatgaatttattgttctg
gtggagaatgcctcaatgaacttactggaggcaactgcacagcgcattctcaaccgcatg
aagttacccttccgggtaggattgatcgaagtatataccgggtgttctatcgggatagca
ctgtgccctgaacacggagatacactagaaaatattatccgtagcgcagacactgccatg
tacaccgcaaaagaacatggaaaacagacctattcgattttttcacaagagatgaataag
aaagtatctgaatacgtctggctagataccaatttacgtaaaggtttagaacaacatcaa
ttacaagttttttaccaacccaagatatccgccaaaacgggtaaagttcatagtgtcgaa
gcattagtccgatggttatcacccgagcgcggtttaatcgccccacttgagtttatctcc
tatgccgaagaatccgggttgatcgggccattgggcaaatgggtattgcaaacttcgatg
caacaagcagtagattggaagaaacgtggaataaacctacgagtggcggtaaatgtatca
gcccggcaattaattgatgaggctatcgtaaccagttttattgagtctcttgaagccagc
gaattagaatccagtttggttgatgttgaattaaccgaaagttgcttaatcgatgatgaa
gattcggccatcaatatcatgaaacaattacgtcacttgggtgctcaggttcatttggat
gacttcggcactggctattcttcgctttctcaattggctcgtatccctattgatgccatt
aaattggatcaaagttttgtacgtgatattgataataatccgatttcacaatctctggtt
aaagccattatcgttgtcgctgaggcacttaaaatgcgggtaattgccgaaggtgtggaa
actaaaggggaagaggaattcctggattctattggcattgatgaaaaacaagggtttctt
tacgccaaaccaatgcccgcagatgaactggagcattggctggtaacacaacaccctcac
cttccactggattag
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