Yersinia intermedia: CH53_1932
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Entry
CH53_1932 CDS
T03608
Symbol
trmA
Name
(GenBank) tRNA (uracil(54)-C(5))-methyltransferase
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
yin
Yersinia intermedia
Brite
KEGG Orthology (KO) [BR:
yin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
yin03016
]
CH53_1932 (trmA)
Enzymes [BR:
yin01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
CH53_1932 (trmA)
Transfer RNA biogenesis [BR:
yin03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
CH53_1932 (trmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_4
Methyltransf_31
MTS
Methyltransf_11
Cons_hypoth95
Methyltransf_15
Methyltransf_12
PrmA
TRM5-TYW2_MTfase
Coq4
TehB
Methyltransf_17
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
AJJ20941
LinkDB
All DBs
Position
complement(2186076..2187179)
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AA seq
367 aa
AA seq
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MTPDILPTDSYDQQLAEKSARLQAMMSPFQAPAAEIFRSPAEHYRMRAEFRVWHDEDDLY
HIMFDQQTKQRIRVEQFPVASLLINRLMSALMTAIRAEPILRRKLFQIDYLSTLSGKLIA
SLLYHRQLDEEWQQKALELRDQLRAQGFDLQLIGRAAKTKIILDHDYIDEVLPVAGREMI
YRQVENSFTQPNAAVNIHMLEWAIDTTKNVSGDLLELYCGNGNFSLALARNFARVLATEI
AKPSVAAAQYNIAANNIDNVQIIRMSAEEFTQAMLGVREFNRLKGIDLSSYNCETIFVDP
PRSGLDKETVKLVQGYPRILYISCNPETLCANLEQLQQTHKISRLALFDQFPYTHHMECG
VLLEKYG
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgactcccgacatcctgccgacagacagctacgaccaacaactggcggaaaaatctgcc
cgtcttcaggcgatgatgtcgccgtttcaggcacctgctgcggaaatattccgttctcct
gccgaacattaccgcatgagagcagagtttcgcgtttggcacgatgaagatgacttgtac
cacatcatgtttgaccagcagactaagcagcgtatccgggttgaacagttcccggtggcg
agtttgttgatcaatcgtctaatgagcgcgttgatgacagccattagagccgaaccaatt
ttgcggcgtaaactgttccagattgattacttatctaccctaagcggtaaactgatcgct
tctttgctgtatcaccgtcaattagatgaagagtggcagcagaaagcgctggaattacgt
gatcagttgcgagcgcaaggcttcgacttgcaattgatcgggcgcgcggcaaaaaccaaa
attattttggatcatgactatatcgatgaagtattgccggttgccgggcgtgaaatgatt
tatcgtcaggtggagaatagtttcacccaaccgaatgcggcggtgaatatccatatgctg
gaatgggcaattgataccactaagaacgtcagtggcgatttattggagttgtactgcggt
aatggtaacttctcgttggcgctagcacgcaattttgcacgcgtgttggcaacagaaatc
gctaaaccctcagtggcggcagcgcaatacaatatcgcggcaaataatatcgataacgtg
caaattatccgcatgtcggctgaagagtttacccaagcaatgctaggtgtgcgcgagttt
aaccgtttgaaggggattgacctgagcagctataactgtgagaccatttttgtcgatccc
ccgcgcagcgggctggataaggagacggtcaagctggtacaaggttatccgcgtatcctt
tatatctcctgtaaccctgaaacgctgtgcgccaatctggaacagttacaacagacacat
aaaatcagccgcttagctctatttgatcagttcccctacacccatcatatggagtgtggg
gtattactagaaaaatacggctga
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integrated database retrieval system
