Yersinia intermedia: CH53_2102
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Entry
CH53_2102 CDS
T03608
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
yin
Yersinia intermedia
Pathway
yin00730
Thiamine metabolism
yin01100
Metabolic pathways
yin01240
Biosynthesis of cofactors
Module
yin_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
yin00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
CH53_2102 (thiC)
Enzymes [BR:
yin01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
CH53_2102 (thiC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AJJ18461
UniProt:
A0A0T9N4V3
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All DBs
Position
complement(2372198..2374198)
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AA seq
666 aa
AA seq
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MSNNTTAKNSSRPRKAQREEAQQFIDTLQGVTFPNSQRIYLQGSRPDILVPMREIQLSPT
LIGGSKDSPRYEDNEAIPVYDTSGPYGDSNATLDVHRGLPKLRDSWIADRQDTAALTSVS
SGFTQQRLADEGLDHLRFEHLPRPKKAIAGKCVTQLHYARQGMITPEMEFIALRENMGRE
RIRGEVLRQQHPGQAFGANLPENITAEFVRQEVAAGRAIIPANINHPESEPMIIGRNFLV
KVNANIGNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWILRNSPVPIGTV
PIYQALEKVNGVAENLTWEMFRDTLLEQAEQGVDYFTIHAGVLLRYVPMTAKRLTGIVSR
GGSIMAKWCLSHHQENFLYQHFREICQICAAYDVSLSLGDGLRPGSIQDANDEAQFAELH
TLGELTKIAWEYDVQVMIEGPGHVPMQMIRRNMTEELEHCHEAPFYTLGPLTTDIAPGYD
HFTSGIGAAMIGWFGCAMLCYVTPKEHLGLPNKEDVKQGLITYKIAAHAADLAKGHPGAQ
IRDNAMSKARFEFRWEDQFNLALDPETARAYHDETLPQESGKVAHFCSMCGPKFCSMKIS
QEVRDYAATQEQAAAQELAAAQGTAAQPIEILQSGMEQMSAEFRSRGSELYHSPINLKTE
ADNEPA
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgtctaataatacaacagctaaaaattcatcacgcccacgtaaagcgcaacgtgaggaa
gctcaacagtttattgataccttgcaaggtgtcactttccccaactcccaacgtatttac
ctacaaggttcacggccagatattctggtaccgatgcgtgaaatccagctcagtccgaca
ttgatcggcggtagtaaggactcaccacgctatgaagataacgaagccatcccggtgtat
gacacatccggcccatatggtgactcaaacgccacgctggatgttcaccgcgggttaccc
aaattacgtgatagctggatagctgatcgccaggataccgccgcactgacctctgtcagc
tctggtttcacccaacaacgtttggctgacgaaggcttagaccatttgcgttttgagcat
ctgccacgcccgaagaaagccatcgccggcaaatgcgtcacccaactgcattacgcccgt
cagggcatgatcacgccagagatggagttcatcgcgctgcgagaaaatatgggccgtgaa
cgtattcgtggtgaggtactacgccagcagcatccagggcaggcttttggcgctaaccta
ccagaaaatatcacggctgaatttgtacgtcaggaagtggcggcgggccgagctatcatc
cccgccaatattaaccacccagaatctgagccgatgattattggtcgtaactttttagtg
aaagtgaacgccaatatcggtaactctgcggtgacctcctccatcgaagaagaagtagaa
aaactggtgtggtcaacccgctggggtgccgataccgtgatggacctgtccactggccgc
tatatccatgaaacccgtgaatggatcctgcgtaacagcccggtccctattggtaccgtt
cctatctatcaggcgctggaaaaagtaaatggtgtggccgagaacctaacctgggaaatg
ttccgtgacacgctgttagagcaggccgagcaaggggtggattactttactatccatgcc
ggtgtgttgttgcgctatgtaccgatgacggccaaacgcttgaccggtatcgtctcccgt
ggtggttcaattatggcgaagtggtgcctttcccatcatcaggaaaacttcctgtatcag
cattttcgcgaaatctgtcagatctgtgctgcctatgatgtctcactatcactgggtgat
ggcctacgccctggttccattcaggatgccaatgatgaagcccagttcgctgagctgcat
accttgggtgaattgaccaaaatcgcctgggaatatgatgtgcaggtgatgattgaaggc
cccggtcatgtgccgatgcagatgattcgccgcaatatgacggaagagttggaacactgc
catgaagcgccattctataccttaggcccgctaaccacggatattgcgccaggttatgac
catttcacttctggtattggggccgccatgattggttggttcggttgcgccatgttgtgt
tacgtcacaccgaaagaacatcttggcctgcctaataaagaggatgtaaaacaaggtctt
attacttataaaatagccgcccatgccgcagacttggccaaaggccaccccggtgcgcag
atccgcgataacgccatgtcgaaagcgcgctttgaattccgctgggaagatcagttcaat
ctggcgcttgatccagaaaccgcacgagcctatcacgacgaaaccctgccgcaagagtcc
ggcaaagtagctcacttctgttcaatgtgcgggccgaaattctgctcgatgaaaatctct
caggaagttcgcgactatgccgctacgcaagaacaggctgcggcacaagagctggcagcg
gcacaaggaacagcagcccaaccgatcgaaatcttacaatcgggtatggaacagatgtca
gcggagttccgctctcgcggcagcgagctgtatcacagccccattaatctcaagaccgag
gccgataatgaacctgcctaa
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