KEGG   Yersinia intermedia: CH53_216
Entry
CH53_216          CDS       T03608                                 
Symbol
dacC
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase dacC
  KO
K07258  serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
Organism
yin  Yersinia intermedia
Pathway
yin00550  Peptidoglycan biosynthesis
yin01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:yin00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    CH53_216 (dacC)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:yin01002]
    CH53_216 (dacC)
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:yin01011]
    CH53_216 (dacC)
Enzymes [BR:yin01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     CH53_216 (dacC)
Peptidases and inhibitors [BR:yin01002]
 Serine peptidases
  Family S11: D-Ala-D-Ala carboxypeptidase A family
   CH53_216 (dacC)
Peptidoglycan biosynthesis and degradation proteins [BR:yin01011]
 Peptidoglycan biosynthesis and degradation
  DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
   CH53_216 (dacC)
SSDB
Motif
Pfam: Peptidase_S11 PBP5_C Beta-lactamase2 Beta-lactamase
Other DBs
NCBI-ProteinID: AJJ20796
UniProt: A0A0T9MLS5
LinkDB
Position
complement(262401..263606)
AA seq 401 aa
MMKFILPFKIKKFTFSAGLLLLALPAAQAADDPAAPPVDAKAYVLMDYNSGKVLVEGNSD
QRLDPASLTKIMSSYVIGQAIKAGKVHPDDLVTVGKDAWATGNPALRGSSLMFLKPGDQV
KLSDLNKGIVIQSGNDASIALADYVAGSQDSFVGLMNNYAKALGLSNTHFMTVHGLDAPG
QYSTARDMAVLGQALIRDVPEEYALHKEKEFTFNKIRQINRNRLLWNTNLNVDGMKTGFT
SGAGHNLVASATEGPMRLISVVLGAPSDRVRFSESEKLLSWGFRFYETVVPIKATNPFVT
QKVWFGDTGKAELGVAEDAAITIPKGKMKDLKASYKLDQAELRAPLAKHQVVGTIEFQLN
GKTIDQRPLVVLNEVKEGGFLSRIWDFVMMKLSQWFGGVFG
NT seq 1206 nt   +upstreamnt  +downstreamnt
atgatgaaatttatcctcccttttaagataaagaaatttactttcagtgccggtttattg
cttctggcgctgcccgccgcgcaggcggctgatgacccagcggctccaccggtagatgcc
aaagcctatgtgttgatggattacaacagtggaaaagtgttggtagaagggaacagtgac
cagcgccttgatccggccagtttgacgaagattatgtccagttatgtgattgggcaggcc
attaaagcggggaaagtgcaccctgatgatttagtgacagtggggaaagatgcctgggct
acgggtaatccggcattacgtggctcctcactgatgtttttgaaaccgggcgatcaggta
aaattgtccgatttgaataaaggtattgtgattcagtcaggcaatgatgccagtattgcg
ttggccgattatgtggctggtagccaagacagttttgttggcctgatgaacaattatgcc
aaagccttgggtctgtcgaatactcactttatgaccgtccatggccttgatgcgccaggg
cagtacagcactgcgcgggatatggcggtattaggtcaggcattgatccgtgacgtgcca
gaagaatatgcgctgcacaaagagaaagaattcacttttaataagatccgtcaaattaac
cgtaaccgactgttatggaacactaatctcaatgtagatggtatgaagaccggttttact
tcgggggcagggcacaatctggttgcctcggcaaccgaagggccaatgcgtttgatctcg
gtggtgctaggcgcacctagtgatcgggttcgctttagtgaaagtgaaaaactgctgagt
tggggcttccgtttttatgaaaccgtcgtgccgattaaagccaccaatcctttcgtgacg
cagaaagtatggtttggtgatactggtaaggcagagcttggggttgcagaggatgcggct
attactatcccgaaagggaaaatgaaggatcttaaagccagctataaattggatcaggca
gaactgcgcgctccgcttgccaaacatcaggtggttggaaccatcgaatttcaacttaat
ggcaagacaattgaccaacgcccgctggtggtattaaacgaagtaaaagagggcggtttc
ttgagtcgtatttgggatttcgtgatgatgaaactcagtcaatggtttggtggcgtattt
ggctaa

KEGG   Yersinia intermedia: CH53_3061
Entry
CH53_3061         CDS       T03608                                 
Symbol
dacA
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase dacA
  KO
K07258  serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
Organism
yin  Yersinia intermedia
Pathway
yin00550  Peptidoglycan biosynthesis
yin01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:yin00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    CH53_3061 (dacA)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:yin01002]
    CH53_3061 (dacA)
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:yin01011]
    CH53_3061 (dacA)
Enzymes [BR:yin01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     CH53_3061 (dacA)
Peptidases and inhibitors [BR:yin01002]
 Serine peptidases
  Family S11: D-Ala-D-Ala carboxypeptidase A family
   CH53_3061 (dacA)
Peptidoglycan biosynthesis and degradation proteins [BR:yin01011]
 Peptidoglycan biosynthesis and degradation
  DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
   CH53_3061 (dacA)
SSDB
Motif
Pfam: Peptidase_S11 PBP5_C Beta-lactamase2 Beta-lactamase
Other DBs
NCBI-ProteinID: AJJ19188
UniProt: A0A0T9MWW3
LinkDB
Position
complement(3431345..3432556)
AA seq 403 aa
MKYVTTSRIIKSLALGTVIVMSAASAANADDVNLKTMIPGVPQIDSEAYVLIDYNSGKVL
AEMNADARRNPASLTKMMTSYVIGQAIKAGKIGPEDMVTVGKDAWATGNPEFKGSSLMFL
KPGDRVPVSKLTRGINLQSGNDACVAMADYVAGSQDSFVNLMNNYVKALGLQNTQFKTVH
GLDAEGQYSSARDMALIGQALIRDVPDEYAIYKEKEFTFNNIRQMNRNGLLWDTSLNVDG
IKTGHTEAAGYNLVASATDGQMRLISAVLGGHTYKGRETESKKLLTWGFRFFETVAPLKV
GKEFASEPVWFGDSDRVQLGVDKDAYLTIPRGRMKDLKASYVLNTPEIHAPLAKNQVVGM
INFQLDGKTIDQRPLVVMNEVKEGGFFSRMVDYIKLMFHRWFG
NT seq 1212 nt   +upstreamnt  +downstreamnt
atgaaatatgtaactacttctcgtattatcaagagcctggcgctcggcactgttattgtt
atgagcgcagcttctgctgcaaacgctgatgacgtaaatctaaaaaccatgatccccggc
gtgccacagatcgactcagaagcgtatgtgctgattgattacaactccggcaaagtattg
gcagaaatgaatgctgatgcgcgtcgtaatccggccagcttgaccaaaatgatgaccagt
tatgttatcggtcaggcaatcaaagcaggcaaaatcgggccagaagatatggttaccgtg
gggaaagatgcctgggcaactggcaatccagaattcaaaggctcttcgttgatgtttttg
aaacccggcgaccgtgtaccggtttctaaactgactcggggtatcaacctgcaatccggt
aatgacgcctgtgtcgcgatggctgattatgttgctggcagccaagactcattcgtcaac
ctgatgaacaactacgttaaagcactgggcctgcaaaacacccagttcaaaacagttcac
ggtttagatgctgaaggccagtacagctctgcgcgcgatatggcgctgattggtcaagca
ctgattcgcgatgtgccggatgagtatgccatttacaaagagaaagagtttaccttcaac
aatatccgtcagatgaaccgtaacggtttactgtgggataccagtctgaatgttgatggt
attaaaaccggccataccgaagctgctggctataacttggttgcctctgcgaccgatggt
caaatgcgattgatctcagccgtactgggtggtcacacctacaaaggccgtgaaactgaa
agtaaaaaattactgacttggggcttccgtttctttgaaaccgtcgcaccgctaaaagta
ggtaaagagttcgcttcagaaccagtctggttcggcgacagtgatcgtgtgcagttgggt
gttgataaagacgcatacctgactattccacgcggccgcatgaaagatttgaaagccagc
tacgtgctgaatacacctgagattcatgcgccactggcgaagaatcaggttgttggcatg
attaacttccagttagatggcaaaaccatcgaccagcgcccattagtggtgatgaacgaa
gttaaagaaggtgggttctttagccgcatggtggactacatcaaactgatgtttcaccgc
tggttcggttag

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