Yersinia intermedia: CH53_218
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Entry
CH53_218 CDS
T03608
Name
(GenBank) cys/Met metabolism PLP-dependent enzyme family protein
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
yin
Yersinia intermedia
Pathway
yin00260
Glycine, serine and threonine metabolism
yin00270
Cysteine and methionine metabolism
yin00450
Selenocompound metabolism
yin00670
One carbon pool by folate
yin01100
Metabolic pathways
yin01110
Biosynthesis of secondary metabolites
yin01230
Biosynthesis of amino acids
Module
yin_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
yin00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CH53_218
00270 Cysteine and methionine metabolism
CH53_218
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
CH53_218
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
CH53_218
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
yin04147
]
CH53_218
Enzymes [BR:
yin01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
CH53_218
Exosome [BR:
yin04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
CH53_218
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
DegT_DnrJ_EryC1
Aminotran_5
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AJJ18780
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Position
265399..266544
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AA seq
381 aa
AA seq
DB search
MAKFDTLTVHTGYTPDSTGAVMPAIYATSTFAQPAPGEHTGYEYSRSGNPTRTALEKAIA
ELEGGSRGYAFASGLAACSTVLELLDQGSHIIAVDDLYGGTYRLLEKVRSRTAGLRVTYV
SPADTEALEHAILPETKMIWVETPTNPLLKLADLAAIAAIAKKHQLISVADNTFASPYIQ
RPLELGFDIVVHSATKYLNGHSDVVAGVAAVGNNPELAEQLGFLHNAVGGILDPFSSFLT
LRGLRTLALRMARHNHSAQRIAEWLEGQPHVENVYYPGLKSHPQHDLASRQMAGFGGMIS
VRLKGDDEYARAVIKRSHLFTLAESLGGVESLISQPYSMTHASIPLETRLKHGITPQLLR
LSVGIEDTEDLIADLDQAING
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagttcgataccctaaccgttcataccggttatacccctgatagcaccggtgct
gtgatgccagccatttatgcaacatccacctttgcacaacccgcgcccggcgaacatacc
gggtatgaatattcacgcagcggtaacccaacacgtactgcgttggaaaaggcgattgca
gaactggaaggcggtagccggggttacgccttcgcctctggtctggcggcctgttcaact
gtgcttgagctgctggatcagggtagccatatcattgcggtggatgatttatatggcgga
acctatcgcctgctggaaaaagttcgtagccgaacggctggtttgcgggtgacttatgtt
tcccctgctgataccgaggcattagaacacgctatattgccagaaaccaaaatgatctgg
gttgagacaccgaccaatccattgctgaaactggccgacctggcggccattgcggcgatt
gccaaaaagcatcaacttatcagtgtggcagataatacttttgcctcaccctatatccag
cgcccgctggaactgggttttgatattgtggtgcattcagccaccaaataccttaatggc
cattctgatgtggtcgctggcgtcgcggcggtgggcaataaccccgaactggcagaacag
ctaggctttctgcacaatgcggtgggcggaattttggatcctttcagcagcttcctgacg
ttacgcggactgcgcaccttggctttgcgcatggcgcgacataatcacagtgctcagcgg
atcgccgagtggctcgaagggcaaccacacgttgaaaatgtctattacccagggctgaaa
agccacccacaacatgatctggcatcacggcagatggcgggtttcggcggcatgatttct
gtgcgattgaaaggggatgatgaatacgcccgtgcggtaatcaaacgctcacatctgttt
acgctggccgaaagtttgggtggggtagaaagtttaatcagccaaccttacagcatgact
catgcctccatccccttagaaacccgtttgaaacacggtattacaccacagttactgcgt
ttatccgtgggcattgaggataccgaggatctgattgcggacttggatcaagcaataaac
ggctaa
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