Yersinia intermedia: CH53_2523
Help
Entry
CH53_2523 CDS
T03608
Name
(GenBank) helix-turn-helix domain protein
KO
K04033
AraC family transcriptional regulator, ethanolamine operon transcriptional activator
Organism
yin
Yersinia intermedia
Brite
KEGG Orthology (KO) [BR:
yin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
yin03000
]
CH53_2523
Transcription factors [BR:
yin03000
]
Prokaryotic type
Helix-turn-helix
AraC family
CH53_2523
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
HTH_11
Med5
Motif
Other DBs
NCBI-ProteinID:
AJJ17592
LinkDB
All DBs
Position
2838652..2839701
Genome browser
AA seq
349 aa
AA seq
DB search
MKKKPELDLHHLFSGEIDPENCKPLVEQENVHQRKSQDVYEHACTITAWQQLYDQLHPGK
FKGELTEILFDDVQIFREYTSLALRQSCMVWPDAFWFGIPELKGEHGFIGAQPLDLQEIA
VRPGGKEFELSTPDDYTILGVVVSHDMLFNHAASLLDPDRLLQLLNSNPALEVNAYQKEF
LWYFINQVLLHGSVDPECMQLANVRKVLCHNLLTAMTNLLEGAQPVSTRQVHSRINYRHL
VSQAREYLLSQSSEPVTVLDLCRELYVSRRTLQNGFHQVLGIGPNAWLKALRLNAVRREL
VSPYSECRTVKDAAMQWGFWHLSQFAIDYQRLFNEKPSASLAARGTRFI
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaaaccagagctcgatctgcaccatcttttttctggggaaatcgatccagag
aattgcaaaccgttagttgagcaagaaaatgttcatcaacgaaagtcgcaagatgtgtat
gaacacgcctgcactatcaccgcatggcagcaactttatgatcagctccacccaggaaag
tttaaaggtgaactaaccgaaattctttttgatgatgtgcagattttccgtgaatacacc
agcttagctctgcgccaatcttgcatggtgtggccggatgccttctggtttgggatccct
gagttgaaaggtgaacacggttttatcggtgcgcaaccactggacttacaagaaatcgcg
gttcgccctggaggaaaagagtttgaactcagcactccagatgattacaccattctcggc
gtggtggtttctcatgatatgttgtttaaccacgcagcatcgttactcgaccctgatcgt
ctgttgcaactgctcaacagtaacccggctctggaagtgaatgcttatcaaaaagaattc
ctatggtatttcattaatcaggtgctattgcacggcagcgtggatcctgaatgtatgcaa
ctggcaaatgtgcgcaaagtgttgtgccacaacctgctaacggcgatgaccaatttactg
gaaggcgcacagccagtctcgacccgacaagtgcacagccgaattaactatcgacatctg
gtctcacaggcgagggaatatctgttgagccaatcttctgagccggtaactgtgttggat
ttatgtcgtgagttatacgttagccgtagaacgctacaaaacggttttcatcaggtgcta
ggcattgggccgaacgcgtggctaaaagcattgcgcctgaatgcggtacgccgcgaactg
gtcagcccatattctgagtgccgcaccgtgaaggacgccgcgatgcagtggggattttgg
catttaagccagtttgctattgattatcagcgtctgtttaatgaaaaaccatcggcttcg
ctggccgcgcgtggtactcgctttatctag
DBGET
integrated database retrieval system
