Yersinia intermedia: CH53_253
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Entry
CH53_253 CDS
T03608
Name
(GenBank) bacterial regulatory s, gntR family protein
KO
K13637
GntR family transcriptional regulator, uxu operon transcriptional repressor
Organism
yin
Yersinia intermedia
Brite
KEGG Orthology (KO) [BR:
yin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
yin03000
]
CH53_253
Transcription factors [BR:
yin03000
]
Prokaryotic type
Helix-turn-helix
GntR family
CH53_253
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Ortholog
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GFIT
Motif
Pfam:
GntR
FCD
HTH_41
Rrf2
HTH_Crp_2
RepL
TrmB
Motif
Other DBs
NCBI-ProteinID:
AJJ20355
LinkDB
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Position
complement(306558..307301)
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AA seq
247 aa
AA seq
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MRLYQEVGSQLREAIVSGQYSLGDRLPPERDIAENFSVSRSVVREALIMLELEKLVEVRK
GSGVYVVNVPAMPANGESAVTADCGYGPFELLQARQLLESEVAAFAAMQATKADIIKMRH
AIEQEKTALAAGAVDESADELFHYLLAQSTQNSVLANMVTEAWQARKTSAMWQVAHSHTL
DFNYRWQWLEDHQKILQAVLRRDSKAAKQAMWQHLENVKLKLLELSDADHPDFDGYLFES
APYQLEE
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgcgattatatcaggaagtaggcagtcaattgcgcgaggcaattgtcagcgggcaatat
agcttgggcgatcgtttaccgcctgaacgtgacatcgccgaaaatttcagtgtcagtcgc
agtgtggttcgtgaagcactgattatgctggagttggaaaaattggttgaggtacgcaaa
ggttcaggtgtctatgtggttaatgtgcctgcgatgccagcaaacggtgagtctgctgtt
actgcggattgtggttacggcccatttgaactgttacaagcccgccaattactggaaagc
gaagtcgctgcttttgctgccatgcaggcgactaaagccgatatcatcaaaatgcgccac
gctatcgagcaggaaaagaccgcactggccgccggagctgtggatgaaagtgccgacgag
ctgtttcattatctgctggcgcaatcaacgcaaaatagcgtgctggccaatatggttact
gaggcctggcaagcgcgcaaaaccagcgctatgtggcaagtcgctcacagtcacaccctt
gattttaactaccggtggcagtggctggaagatcaccagaaaatcttacaagcggtgtta
cgccgtgacagcaaagcagccaagcaagccatgtggcagcatttggaaaatgtaaaactg
aagttgcttgagctttcagatgcggatcatccagatttcgatggttatttgtttgagtct
gcaccgtaccagcttgaagaataa
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