Yersinia intermedia: CH53_2555 Help Entry CH53_2555         CDS       T03608                                  Name (GenBank) Rhs element Vgr family protein   KO K11904   type VI secretion system secreted protein VgrG Organism yin  Yersinia intermedia Pathway yin03070   Bacterial secretion system Brite KEGG Orthology (KO) [BR:yin00001]  09130 Environmental Information Processing   09131 Membrane transport    03070 Bacterial secretion system     CH53_2555  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    02044 Secretion system [BR:yin02044]     CH53_2555 Secretion system [BR:yin02044]  Type VI secretion system   Imp/Vas secretion system core components    CH53_2555 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Phage_GPD Gp5_trimer_C Phage_base_V Gp44-like_2nd Motif Other DBs NCBI-ProteinID:  AJJ19302 LinkDB All DBs Position 2880506..2885059 Genome browser AA seq 1517 aa AA seqDB search MPYLLGEPALVLSKLEGEEAFSTLYSYTITAKTPANPSIPWQTASNVDLKALIGKEMTIE MELDGNGLDYVKGVGKGTREISGLVEKARFIGRDANQAMFEIVLRPWFYLTDLTSDFKIF QNKNVVDIIDEVLADYNFPFEKRLATAYPILDFQVQYGETDFNFLQRLMEEWGIYWFFEH DDHKQKLILVDHVGAHKRYFSEAYHTIEYLSDEPKAGEEYITQFQTQETLTTGRWVYNDY DFTKSRADILTMDSKPRKTSFNDLEIYQWPGDYDQPDIGEHLARVRIEERGALGSRAIGS GEIRGIVCGTNFELQGFPVDKANREYMVISSRLSVFEVAQLSNGDEFRYETSFVVQPVTK IYRHPQLTPKPKTSGPQNAIVVGPPGEEVWTDEYGRVKVRFVWDRYGKNTESDSCWLRVS QAWAGNSFGGIYIPRIGQEVLVDCINGDPDRPLVSGSLYNNVTRPPWDLPANATQSGMVS RTIGGGLNNYNGVRFEDKPGQEQYWEQAERDMARLTKNDEKQIIGANADLSIGANRSVIV GANSTSTVLGASTQSIALASSIQVGLARSVVVGATHALNVALANATNVGGANLTNVGGYN ALSVGGAHQVAAGGAATLVAGGAVAIGAGGELVLSADTIKIIGKKKVIIQGGEIHLNSDD CCGGGGGGGAGGGLAALSSLAGLLVLDGGIGLPLPLPPLPIPPVETPAPTETPEPTLTPA PTATPAPTATPAPTLTPEPTVTPAPTVTPAPTLTPEPTVTPAPTVTPAPTLTPEPTVTPA PTVTPAPTATPEPTETPEPTETPEPTETPEPTETPAPTETPEPTETPEPTETPEPTETPE PTETPEPTETPEPTETPEPTETPEPTATPEPTETPEPTETPEPTETPEPTETPEPTETPE PTETPEPTETPEPTETPAPTETPEPTETPAPTETPEPTETPEPTETPEPTETPEPTETPE PTETPEPTETPEPTETPEPTETPEPTETPEPTATPEPTETPEPTETPEPTETPEPTETPA PTETPEPTETPEPTETPEPTATPEPTATPEPTETPEPTETPEPTATPEPTATPEPTATPE PTETPEPTETPEPTETPEPTETPEPTETPEPTETPEPTATPAPTETPEPTETPEPTETPE PTETPEPTETPEPTATPEPTETPEPTETPEPTETPEPTETPEPTETPEPTETPEPTETPE PTETPEPTETPEPTETPEPTETPEPTETPEPTETPEPTETPEPTETPEPTETPEPTETPE PTATPEPTETPEPTETPEPTETPEPTETPEPTETPEPTETPEPTETPEPTETPEPTETPE PTETPEPTETPEPTETPEPTETPEPTETPEPTETPEPTETPEPTETPEPTETPEPTETPE PTETPEPTATPEPTETPEPTETPEPTETPEPTETPEPTETPEPTETPEPTETPAPTETPE PTETPEPTETPEPTETPEPTETPEPTETPEPTETPEPTETPEPTETPEPTETPEPTETPV PTETPTPTPTDEQTPPP NT seq 4554 nt NT seq  +upstreamnt  +downstreamnt atgccctatttattgggtgagcctgcgctggtactgtcaaagttagaaggagaggaagcc ttttcgactttgtattcgtataccatcacggcaaagacaccggctaatccatctattcct tggcaaacagcctctaatgttgatctcaaagccttaattggtaaagagatgaccattgaa atggaattggatggtaatggccttgattatgtaaaaggtgtaggtaaaggcactcgtgag atttcaggtctggttgagaaagccagattcattggccgtgacgctaatcaggcgatgttt gaaattgttctgaggccttggttctatctaaccgatttaacttctgactttaaaattttt cagaacaaaaatgtggtagatattattgatgaagtgctggctgattataatttcccgttt gaaaaacgactggcaaccgcatatccgatacttgattttcaagtgcaatatggtgagacc gactttaactttctccaacgtttgatggaagaatggggtatttattggttttttgagcat gatgatcataaacaaaaattaattctggtggatcatgttggtgcccataaacgttatttc agcgaagcctatcatacgattgaatatttatcagatgagccaaaggctggtgaagaatat attacccaattccagactcaagaaactctgacaacagggcgttgggtttataacgactat gattttaccaagtcgcgagctgacattctgacgatggacagcaagccgcgtaaaaccagt tttaatgatcttgaaatttatcaatggcctggggactatgaccaacccgatattggtgag cacctggcacgtgttcgtatcgaagagcgtggggcattgggctcgcgagctataggctct ggcgaaattcgtggcatcgtttgtggtactaactttgaactgcaaggattcccggttgat aaagctaaccgcgaatacatggttatctccagccgtttatctgtttttgaagtggcacag ttatccaacggagatgagtttcgctacgaaacctccttcgtggtacagcctgtcaccaag atttatcgtcatccgcagttgacaccaaaaccaaaaaccagcggaccacagaacgccatt gttgtcggcccaccaggggaagaggtttggaccgatgaatatggccgggtaaaggttcgt tttgtctgggatcgttacggtaagaataccgagtcagactcgtgctggttgcgggttagc caggcatgggcaggaaatagttttggtgggatttatattccgcgtattggccaggaggtt ttggttgactgtattaatggcgatcctgaccgtccgctagtgagtggtagtctctacaat aacgttacgcgcccaccttgggatttacctgccaatgcgacacaaagtggcatggtcagc cgcactattggcggagggttaaacaactataacggcgtgcgttttgaagataaacccggt caggaacaatactgggagcaggctgagcgcgatatggcgcgtttaacgaaaaatgatgaa aaacagattattggtgctaatgctgatttaagcatcggtgctaaccgtagtgtcatcgtt ggtgctaattcgacatcaacggtcctcggtgcatcaacgcaatccatcgcgttagcttct tctatacaagtaggattggcgcgaagtgtagtggttggggcgactcatgctttgaatgta gctttggccaatgcgaccaatgtgggcggtgctaacctgactaacgtcggggggtacaac gcactttctgtggggggcgctcatcaggtagccgctggcggagctgcgacattggttgcc ggtggtgcagtggcgatcggtgcgggtggtgagttagtgctcagtgctgataccatcaaa attatcggtaagaagaaagttatcattcagggaggagagattcatcttaactctgatgat tgttgtggcggcggtggtggtggcggtgcaggtggtggtttagccgcactttcaagtttg gctgggcttttggtattggatggaggaattgggctaccgttgccattacctccattgccg ataccgccggtcgaaacgccagcgccgactgagacgccagagccgacgttgacgccagcg ccgaccgcgacgccagcgccgactgcgacgccagcgccgacgttgacgccggagccgact gtgacaccagcgccgacagtgacgccagcgccgacgttgacgccggagccgactgtgaca ccagcgccgacagtgacgccagcgccgacgttgacgccggagccgactgtgacaccagcg ccgacagtgacgccagcaccgactgcgacgccagagccgaccgagacgccagagccgact gagacgccagagccgaccgaaacgccagagccgaccgagacgccagcgccgaccgaaacg ccagagccgaccgaaacgccagagccgaccgaaacgccggagccgaccgagacgccagag ccgaccgaaacgccggagccgactgagacgccggagccgactgagacgccagagccgact gagacgccagagccgaccgcgacgccagagccgaccgaaacgccagagccgaccgaaacg ccagagccgactgagacgccagagccgaccgagacgccggagccgaccgagacgccagag ccgaccgagacgccagagccgaccgagacgccagagccgaccgaaacgccagcgccgacc gagacgccagagccgactgagacgccagcgccgaccgagacgccagagccgaccgagacg ccggagccgactgagacgccagagccgaccgagacgccagagccgaccgagacgccagag ccgaccgagacgccagagccgaccgagacgccagagccgaccgagacgccagagccgacc gagacgccagagccgaccgaaacgccggagccgaccgcgacgccagagccgactgagacg ccagagccgaccgaaacgccagagccgaccgagacgccagagccgactgagacgccagcg ccgaccgagacgccagagccgactgagacgccggagccgaccgagacgccagagccgacc gcgacgccagagccgaccgcgacgccagagccgaccgaaacgccagagccgaccgagacg ccagagccgaccgcgacgccagagccgaccgcgacgccagagccgaccgcgacgccagag ccgaccgaaacgccagagccgaccgagacgccagagccgactgagacgccagagccgact gagacgccggagccgaccgagacgccggagccgaccgagacgccagagccgaccgcgacg ccagcgccgaccgaaacgccagagccgaccgaaacgccagagccgaccgagacgccagag ccgactgagacaccggagccgaccgagacgccagagccgaccgcgacgccggagccgacc gagacgccagagccgaccgagacgccagagccgaccgaaacgccagagccgactgagacg ccggagccgactgagacgccagagccgaccgagacgccagagccgactgagacgccagag ccgaccgagacgccagagccgaccgagacgccggagccgaccgagacgccagagccgacc gagacgccggagccgactgagacgccagagccgaccgagacgccagagccgaccgagacg ccggagccgactgagacgccagagccgaccgagacgccagagccgaccgagacgccagag ccgaccgcgacgccagagccgaccgagacgccagagccgaccgagacgccagagccgacc gagacgccagagccgaccgagacgccagagccgaccgagacgccagagccgactgagacg ccagagccgaccgagacgccagagccgaccgagacgccagagccgactgagacgccagag ccgactgagacgccagagccgaccgaaacgccagagccgaccgaaacgccagagccgact gagacgccagagccgaccgagacgccagagccgaccgagacgccagagccgaccgagacg ccagagccgaccgagacgccagagccgaccgagacgccagagccgaccgagacgccagag ccgaccgagacgccagagccgaccgcgacgccagagccgactgagacgccagagccgacc gagacgccagagccgaccgagacgccggagccgactgagacgccagagccgactgagacg ccggagccgaccgaaacgccggagccgactgagacgccagcgccgaccgagacgccagag ccgactgagacgccagagccgaccgagacgccagagccgaccgagacgccagagccgacc gaaacgccagagccgaccgaaacgccggagccgaccgagacgccagagccgaccgagacg ccggagccgaccgaaacgccagagccgactgagacgccagagccgaccgagacgccagtg ccgaccgagacacctacgcctacgccgacggatgaacaaactccgccgccgtga

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