Yersinia intermedia: CH53_2622
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Entry
CH53_2622 CDS
T03608
Symbol
gcvP
Name
(GenBank) glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
yin
Yersinia intermedia
Pathway
yin00260
Glycine, serine and threonine metabolism
yin00630
Glyoxylate and dicarboxylate metabolism
yin00670
One carbon pool by folate
yin00785
Lipoic acid metabolism
yin01100
Metabolic pathways
yin01110
Biosynthesis of secondary metabolites
yin01200
Carbon metabolism
Module
yin_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
yin00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
CH53_2622 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CH53_2622 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
CH53_2622 (gcvP)
00670 One carbon pool by folate
CH53_2622 (gcvP)
Enzymes [BR:
yin01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
CH53_2622 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
AJJ20520
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Position
2951084..2953963
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AA seq
959 aa
AA seq
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MTQNLSQLEHNDAFIQRHIGSSAEQQQQMLAAIGANSLSTLIQQIVPADIQLPSPPQVGD
AATEHQALAELKGIASQNQCYKSYIGMGYSPVLTPPVILRNMLENPGWYTAYTPYQPEVS
QGRLEALLNFQQLTQDLTGLDLASASLLDEATAAAESMALAKRASKLKDANRFFVADDVH
PQTLDVVRTRAETFGFEVIVDRAAKVLELDGVFGVLLQQVGTTGELHDYSALLSELKKRK
IITSVAADIMALVLLTAPGKQGADVVFGSAQRFGVPMGYGGPHAAFFACRDEFKRSMPGR
IIGVSRDAAGNTALRMAMQTREQHIRREKANSNICTSQVLLANIASLYAVYHGPQGLQRI
AGRIHRMTDILAAGLQQAGLSLRFQHWFDTLTVEVKDKATVLARALSFGINLRTDIHGAV
GITLDETTSRDDIQTLFALLAGDSHGLDIDQLDAKVSQSSQSIQATMLRQEPILTHPVFN
RYHSETEMMRYMHRLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFAELHPFCPPE
QAAGYQQMIGQLSQWLVQLTGYDAVCMQPNSGAQGEYAGLLAIRRYHESRNQANRHICLI
PSSAHGTNPASAQMAGMSVVVVACDKQGNIDLHDLRQKAEEAGDELSCIMVTYPSTHGVY
EETIREVCQIVHQFGGQVYLDGANMNAQVGITTPGYIGADVSHLNLHKTFCIPHGGGGPG
MGPIGVKAHLAPFVPGHSVVQIDGMTTQQGAVSAAPFGSASILPISWMYIRMMGADGLKQ
ASQVAILNANYIATRLKAAYPVLYTGHDGRVAHECILDIRPLKEATGISEMDIAKRLIDF
GFHAPTMSFPVAGTLMVEPTESESKVELDRFIDAMLAIRSEIDKVAQGEWPLEDNPLVNA
PHTQAELVGDWQHPYSRELAVFPVAGVMENKYWPAVKRLDDVYGDRNLFCSCVPIADYE
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgactcagaatctcagccagcttgaacataacgatgcttttattcagcgccacattggc
tcctctgctgaacaacagcaacagatgttggccgccattggtgccaactcgttaagtaca
ttgatccagcagattgttccggcagatatccaattgccaagcccgccacaagtgggtgat
gctgccactgaacaccaggcgctggcggaacttaaagggattgccagccagaatcagtgc
tataaatcctacattggcatgggctacagcccggtactgaccccgccggttatcttgcgt
aatatgctggagaacccaggctggtacaccgcctacacgccttatcagccagaagtttct
cagggccgtcttgaggcgctgttgaatttccagcaattgacacaagacctgacggggttg
gatctggcttctgcctctttgctggatgaggctactgccgcagcagaatcgatggcattg
gctaagcgagccagtaagctgaaggacgctaatcgcttctttgtggctgatgatgttcat
ccgcaaacgctggatgtggtgcgaactcgagctgaaacttttggttttgaagtgattgtc
gaccgcgctgcaaaagtgctggagctggatggtgtttttggtgtgttgctgcaacaagta
ggcaccaccggtgaactgcatgactacagcgcgctgctgtctgaactgaaaaaacgtaaa
atcattaccagcgtggctgccgatattatggcgctggtgctgttgactgcgccgggtaaa
caaggtgccgatgtggtatttggctccgcccagcgctttggtgtgccgatgggttatggc
ggcccacatgctgcattctttgcctgccgtgacgaatttaaacgctcgatgccgggccgc
attatcggggtatcacgcgacgctgccggtaatactgcattgcgtatggcgatgcagacc
cgtgagcaacatattcgccgcgagaaagctaactccaacatctgtacctcacaggtacta
ctggccaatattgccagcctgtatgcggtttatcatggcccacagggcttgcagcgtatc
gctggccgcattcaccgtatgaccgatattctggctgcgggtttgcaacaagcaggcctg
agtctccgtttccagcactggttcgataccctgacagttgaagtcaaagacaaagctacg
gtattggctcgtgcattgagttttggtattaacctgcgcactgatattcatggcgctgtg
ggtatcacgctggatgaaaccacctcccgcgacgatatccagactctgtttgccctgtta
gccggtgatagccacggcctggatattgaccagcttgatgctaaagtcagccagagcagc
cagtcgatacaggctacgatgctgcgccaagagccgattctgacccatccggtattcaat
cgttaccacagcgaaaccgaaatgatgcgttatatgcatcgtttagagcgcaaagattta
gcgctgaatcaggcgatgatcccgttgggttcttgtaccatgaagttgaacgctgccgcc
gagatgatcccgattacctggccggaattcgctgagttacacccattctgcccgccagag
caagcggctggttatcagcagatgattggtcaactgtcacaatggttggtgcaactgact
ggctatgacgcggtgtgtatgcaaccaaactcaggtgcgcagggagagtatgccggtttg
ctggctatccgccgttaccacgaaagccgtaatcaggcgaatcgtcatatctgcctgatc
ccaagctcagcccacggcactaacccagcttcggcacaaatggccggtatgtcggtggtg
gtggtagcctgtgataagcaaggcaatatcgacttacatgacttgcgccagaaggcagaa
gaagcgggtgatgagttgtcttgcattatggtgacttacccatcaacccacggcgtgtat
gaagaaaccatccgtgaagtttgccaaatcgttcatcagtttggtgggcaagtttatctg
gatggcgcgaacatgaatgcgcaggttggcatcactacgccgggttatatcggtgccgat
gtatcgcatcttaacttgcacaaaaccttctgtatcccacatggcggtggcggtccaggc
atggggccaattggcgtcaaagcccatttggcaccttttgtacccggccacagtgtggtg
caaattgacggcatgaccactcagcaaggcgcagtttcagccgcgccatttggtagtgca
tcgatcttacctatcagttggatgtatatccgcatgatgggcgctgatggcttgaagcaa
gccagtcaggtggccattttgaatgccaactatatcgctacccgtctgaaagccgcctat
ccggtgttgtataccggccacgatggccgtgtggcacatgagtgtattctggatattcgt
ccgttgaaagaggcgaccggtatcagtgaaatggatatcgctaaacgactgattgatttc
ggttttcatgcgccaactatgtcattcccggttgccggaacactgatggtggagccgaca
gaatcagaaagcaaagtggagctggaccgctttatcgatgcgatgttagctattcgtagc
gagattgacaaagtggcccaaggcgaatggccgctggaagataacccgctggtgaatgcg
cctcatactcaggcggagctggtgggggactggcagcacccttacagccgtgagctggct
gtgttcccggttgcaggtgtgatggaaaacaaatattggcctgcggtaaaacgtttggat
gatgtgtatggcgaccgtaatctgttctgctcatgtgttccaattgctgattatgagtaa
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