Yersinia intermedia: CH53_2684
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Entry
CH53_2684 CDS
T03608
Symbol
rppH
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
yin
Yersinia intermedia
Pathway
yin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
yin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CH53_2684 (rppH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yin03019
]
CH53_2684 (rppH)
Messenger RNA biogenesis [BR:
yin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CH53_2684 (rppH)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
AJJ17931
UniProt:
A0A0T9M9U3
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Position
3014856..3015383
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AA seq
175 aa
AA seq
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MIDDDGYRPNVGIVICNRQGEVLWARRYGQHSWQFPQGGINPGETPEQAMYRELFEEVGL
NKKDVRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQRWFLLQLMCNEADINMQRSSTPE
FDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFAATVMPVQEVVPPRVPPAYRRKRG
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgatgatgatggctaccgcccgaacgtgggtatcgtaatttgtaatcggcaaggc
gaagtgttgtgggccaggcgttacggtcagcactcttggcagtttcctcaaggggggata
aaccccggtgaaacaccagagcaggcaatgtatcgcgaactttttgaagaggtaggactt
aacaaaaaggatgtccgtattctggcttcaacccgtaactggttacgttacaaattacca
aaacgtttggtgcgttgggatacaaagccggtgtgcatcggccaaaaacaacgatggttt
ctactacagttaatgtgtaatgaagccgatatcaacatgcaacgcagcagtaccccggag
tttgatggctggcgctgggtcagttattggtacccggtgcgtcaggtggtctcttttaaa
cgtgatgtttatcgtcgtgtgatgaaagaatttgctgcaaccgtcatgcccgtgcaggag
gttgttccaccacgggttccgcccgcttatcgccgtaaaagaggttaa
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