Yersinia intermedia: CH53_2737
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Entry
CH53_2737 CDS
T03608
Name
(GenBank) hypothetical protein
KO
K01582
lysine decarboxylase [EC:
4.1.1.18
]
Organism
yin
Yersinia intermedia
Pathway
yin00310
Lysine degradation
yin01100
Metabolic pathways
yin01110
Biosynthesis of secondary metabolites
yin01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
yin00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
CH53_2737
Enzymes [BR:
yin01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.18 lysine decarboxylase
CH53_2737
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Motif
Other DBs
NCBI-ProteinID:
AJJ21292
LinkDB
All DBs
Position
3077466..3079607
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AA seq
713 aa
AA seq
DB search
MNIIAIMGPMGVYYKGEPIRELNDALLAKGFQLIYPQDRGDLLKLIEHNARIIGVIFDWD
QHSDELCTEINDLNEYLPLYAFINTTSSLDVSLNEMRMALYFFEYALNAADDIAQHIEQY
TAEYMDSITPPLTKALFNYVKEGKYTFCTPGHMAGTAFQKSPVGSLFYDFFGANTLKADV
SISVTELGSLLDHSGPHLEAEEYIARTFNAEQSYMVTNGTSTANKIIGMYSSPSGSTVLI
DRNCHKSLTHLLMMTNIIPLYLRPARNAYGILGGIPQHEFTRESITEKIAQTKNASWPVH
AVITNSTYDGLLYNTDYIKQTLDVPSIHFDSAWVPYTNFHEIYEGKSGMSGERVAGKVFY
ETQSTHKLLAAFSQASMIHIKGDYNEGTFNEAYMMHTTTSPNYGIVASMETAAAMMRGKP
GRRMIMRSIERAMHFRKEVRRLRSQSDNWFFDVWQPEDIDEIACWPLQPGQKWHGFSNAD
ADHMYLDPIKVTILTPGMSSEGELEDEGIPAALVAKFLDERGIVVEKTGPYNLLFLFSIG
IDKTKAMSLLRGLMEFKRAYDLNLRVKNMLPDLFAEDPDFYRHMRIQDLAAGIHQLIRKH
DLPRLMRQSFDVLPEMKLTPYDMFQQQIRGNIAACEMCDLIGKVVANMILPYPPGVPLVM
PGEMISEESRAVLDFLLMLCAIGAHYPGFETDIHGAKRDDDGRYWVNVLKTND
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcatcgcaatcatggggccgatgggggtttactacaaaggtgaacctattcgt
gaattgaacgatgccctactggccaaaggttttcagcttatctaccctcaggatcgtggt
gatctgcttaaactgatcgagcataatgcgcggattattggtgtgattttcgattgggac
cagcacagtgatgagctttgcactgaaattaatgatctgaacgagtatctcccactttac
gcgtttatcaatactacctcctcattagatgtcagtttaaatgaaatgcggatggcactt
tatttctttgaatatgcattgaatgcggcagatgatattgcacaacatattgaacaatat
accgccgagtatatggatagcatcactccgccgttaaccaaagcgttgtttaattacgtt
aaagaagggaaatataccttctgcacgccagggcatatggcagggacagcatttcaaaaa
agcccggtaggcagcttattctatgacttctttggtgctaacaccctcaaggcggatgtg
tcgatttcagtgactgaactcggatcattattagatcacagtggccctcatctggaagct
gaagaatatattgcccgtactttcaacgctgagcagagctatatggtgacgaatgggaca
tcaacggcaaataaaatcattggcatgtattcgtctccctctggcagtacggtattgatt
gaccgtaattgtcataagtctctgacacatcttctgatgatgaccaatatcatcccgcta
tatttgcgcccggcccgtaatgcttacggtattttgggtggcatcccgcagcacgaattt
acgcgcgaatccattactgagaaaattgcacaaaccaaaaatgccagttggccggtgcat
gcggtgataacgaactcgacctatgatgggctgctctataatactgattatattaagcag
acactggatgtcccttcaattcactttgattccgcctgggtgccttataccaatttccat
gagatctatgaagggaaaagtggcatgagcggggaacgggttgcgggcaaagttttctat
gaaacgcaatcgacacataaattattggcggcattctctcaagcttcgatgattcatatt
aaaggtgattacaatgaaggcacttttaacgaagcttatatgatgcacaccaccacttca
ccgaattacggcattgtggcatcaatggaaactgccgcagcaatgatgcgtggtaaaccg
ggcaggcgcatgattatgcgctccattgagcgtgcgatgcattttcgcaaagaggttcgc
cgtttacgttcacagagtgacaactggttctttgatgtctggcagccagaagatattgat
gaaatagcctgttggccgttgcaaccggggcaaaagtggcatggcttcagcaatgcagat
gcagatcatatgtatctggatccgatcaaagtgaccatcctgacgccgggtatgagcagt
gaaggggaacttgaagacgaagggatccctgccgcactggtcgctaaatttctcgatgaa
cgtggcatcgtggtagagaaaaccgggccatataatttgctgttcctgttcagtattggt
attgataaaaccaaggcgatgagcttattgcgcggcctaatggagtttaagcgcgcttat
gatcttaacttgcgggttaaaaacatgctgccggatctgtttgctgaagatcccgatttt
taccgtcatatgcgcattcaagatctggccgccggtatccaccaattgatccgtaaacat
gacttaccccgtttaatgcgccagtcttttgatgtactgccagagatgaaactcacgccg
tatgacatgttccaacagcagattcgcggtaatatagcggcctgcgaaatgtgtgatttg
ataggcaaagtcgtggccaacatgattttgccttacccgccgggggtaccgttggttatg
ccgggtgaaatgatcagtgaagagagccgtgcagtcttggacttcctgctgatgttgtgt
gccatcggtgcacattaccctgggtttgaaacagatattcacggtgctaaacgcgatgat
gatggtcgctattgggtcaatgtactgaagacaaatgattaa
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