Yersinia intermedia: CH53_2763
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Entry
CH53_2763 CDS
T03608
Name
(GenBank) RNA 2'-O ribose methyltransferase substrate binding family protein
KO
K03214
RNA methyltransferase, TrmH family [EC:2.1.1.-]
Organism
yin
Yersinia intermedia
Brite
KEGG Orthology (KO) [BR:
yin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
yin03009
]
CH53_2763
03016 Transfer RNA biogenesis [BR:
yin03016
]
CH53_2763
Ribosome biogenesis [BR:
yin03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CH53_2763
Transfer RNA biogenesis [BR:
yin03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
CH53_2763
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
SpoU_sub_bind
Motif
Other DBs
NCBI-ProteinID:
AJJ19997
LinkDB
All DBs
Position
3103790..3104884
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AA seq
364 aa
AA seq
DB search
MNDSFSGKNGKVKVMYVRSDESSSDDRNNNNRSKNQRPASKGRPGDNAGRGSSPRSNDSR
RNDSGRNERVSPSRPARSEGNGPYDSPWKTVSRAPSEEPEFDHGGISGKSHVDPAQLRRQ
RAEETRVYGENACKALFESRPDAIVRAWFVQSVTPRFREALKWMAANRKAYHVVEEEELA
KASGTEHHGGVCFLIKKRQGLDAETYLQQQTQAKDCVLALEDVGNPHNLGGIMRTCAHFG
INGVLLQDPAMLESGAAVRTAEGGAEHIKAINADDFLSVLDTFRKAGYTIVTTSSHKGVS
LSKAELPAKMVLVLGQESDGLTDSAWQQGDMSVSIGGTGRVESLNVSVAAGILLAEWWRQ
NSAQ
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgaacgattcatttagtggcaaaaacggcaaagtcaaagtgatgtacgtccgcagtgac
gaaagcagcagcgacgaccgtaacaacaataaccgtagtaaaaaccagcgtccggcaagc
aaaggtcgtccaggtgataatgcaggtcggggcagctcaccgcgtagtaatgattcacgt
cgtaacgattccggccgtaatgaacgcgtgagtcctagccgcccggcacgttctgaaggc
aatggaccttacgattcaccgtggaaaacagtatctcgtgcgccatcagaagagccagag
tttgatcatggtggtatcagcggtaaaagtcatgtagatccggcacaattgcgccgtcag
cgggctgaagaaacgcgtgtttatggcgagaacgcttgtaaggcgttatttgaaagccgc
ccagacgctatcgtccgtgcctggtttgtgcaatctgttaccccacgttttcgcgaagcg
ctgaaatggatggcggctaaccgcaaggcttatcatgtggttgaggaagaagagctggcg
aaggcttctggcactgaacaccatggtggcgtgtgcttccttatcaagaaacgccaggga
ctggatgcagaaacctatctgcaacagcagactcaggctaaagattgtgtactggcgctg
gaagatgtgggtaacccacataacctcggcggcattatgcggacctgcgcgcatttcggt
attaacggcgtattgttgcaagatccggcgatgctggagtcgggtgcggcggtgcgtacg
gctgaaggtggtgcggaacatatcaaggctatcaatgcagacgatttcctctcagtgttg
gataccttccgtaaagccggttacaccattgtgaccacatcgagccataaaggtgtcagt
ctgtcaaaagctgaactgcctgccaaaatggtgctggtattagggcaagagagtgacggc
ctgaccgatagcgcttggcagcagggcgatatgagtgtgtctatcggcggtactggccgg
gtagaaagcctgaacgtatcagtggcagccggtattctgctagcagaatggtggcgtcag
aatagcgcccaataa
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