Yersinia intermedia: CH53_2900
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Entry
CH53_2900 CDS
T03608
Symbol
dnaX
Name
(GenBank) DNA polymerase III, subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
yin
Yersinia intermedia
Pathway
yin03030
DNA replication
yin03430
Mismatch repair
yin03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
yin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CH53_2900 (dnaX)
03430 Mismatch repair
CH53_2900 (dnaX)
03440 Homologous recombination
CH53_2900 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
yin03032
]
CH53_2900 (dnaX)
03400 DNA repair and recombination proteins [BR:
yin03400
]
CH53_2900 (dnaX)
Enzymes [BR:
yin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CH53_2900 (dnaX)
DNA replication proteins [BR:
yin03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CH53_2900 (dnaX)
DNA repair and recombination proteins [BR:
yin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CH53_2900 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_tau_5
DNA_pol3_delta2
DNA_pol3_tau_4
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
AAA_22
RuvB_N
AAA_5
AAA_30
AAA_18
AAA_2
PIF1
AAA_assoc_2
ResIII
AAA_16
AAA_14
PglZ_2nd
AAA_7
TsaE
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AJJ18256
UniProt:
A0ABX6F7G0
LinkDB
All DBs
Position
3271374..3273350
Genome browser
AA seq
658 aa
AA seq
DB search
MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK
GLNCETGITATPCGTCANCLEIEQGRFVDLIEIDAASRTKVEDTRELLDNVQYAPARGRF
KVYLIDEVHMLSRHSFNALLKTLEEPPAHVKFLLATTDPQKLPVTILSRCLQFHLKVIDV
EVIRGQLEKILLAEQISSDARALQLLARAADGSMRDALSLTDQAVAMGDGHVTTATVSQM
LGTLDDEQPLAIIEALVSADGARVMAQVEQAASRGVDWENLLVETLSLLHRIAMVQLLPS
MLDNHYATVEPRLRELARTLPPTDIQLYYQILLMGRKELAYAPDRRMGVEMTLLRALAFH
PKAIIAEPQIVPVSAPAAIAGNNAPQYAQNTQQPVSTHSAVPSQDAPPLGLAADVGTQLP
DSTAQLLQARTQLLRQSGATTPKKNEPAAPGKARPATSALERLASVTERSQQRLAAKSTE
EKKPAKKEAYRWTAQNQPETVAEPVTTPKALRSALEHEKTPELSAKLAEEAMVRDPWAAE
IDKLHIPKLVQQLALNAFKEVIEPGNICLHLRSSQRHLNSPSAQKTLGDALSELHGNAVT
LSVIEDDNPAERTPLEWRQAIYEEKLAQARQSIIADNNIQTLRRFFDAELDEESIRPV
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcaggtccttgcccgtaagtggcgcccccaaacgttcgcagacgtcgttggt
caggaacatgtcctgacggcgctggccaatggcctttcattagggcgtatccatcacgcc
tatctattctccggtacccgtggcgttggtaaaacgtctattgcccggctgttagccaaa
ggtcttaactgcgaaacgggcattaccgcgacgccttgcggtacctgtgctaactgcctg
gagattgagcaaggccgttttgttgatctgatcgagatagacgccgcctcgcgcacgaaa
gtagaagatacccgagaactgctggataacgttcaatatgcgccagcccgtggccgcttc
aaagtgtacttaattgatgaagtgcatatgctgtcgcgccacagtttcaatgcgctacta
aaaacgcttgaagagccgccagctcatgtgaaattcttgctggcgaccacggatccacaa
aaattgccggtgactatcctttcccgctgtttgcaattccatctcaaagtgatcgatgtt
gaggttatccgtgggcagcttgaaaaaatattgctggcagagcaaatcagtagtgatgct
cgtgcattgcagttactggcgcgggcggccgatggtagtatgcgcgatgcgctcagcctg
acagatcaggccgttgcgatgggcgatgggcatgtgactacagccactgttagccaaatg
ctgggaacgctggatgacgagcaacccttggcgattatcgaggcgctggtcagtgctgat
ggtgcgcgagtgatggcgcaggtagagcaagcggcatctcgtggtgttgattgggaaaac
ttattggttgaaaccctaagcttgctgcaccggattgcgatggtacaactgctgccatca
atgttggataaccattatgcgacggttgagcctcggttacgcgaactggctcgcacattg
ccgcctacagatatccagctatattatcaaatactgttgatgggccgtaaagagctggct
tatgcgccagatcgccgcatgggggtcgaaatgaccttattgcgtgcgctggcctttcat
cctaaagcaataatcgctgaaccgcagattgttcctgtcagtgcgccagcagccattgca
ggtaataacgcacctcagtacgcccaaaatacccaacaacctgtatcgactcactcagcc
gtgccatcgcaagatgcaccgccgctagggcttgccgctgacgtgggtactcaactaccc
gattcgactgcgcagcttcttcaggcgcgaacccagttgttgcggcaatccggggcaacc
acaccaaaaaagaatgagccggcagcgccaggaaaagcgcggccggcaacctcggcactg
gagcgtctcgcttcggtgactgagcgcagccagcagcgtctggccgctaaatcaaccgaa
gaaaagaaaccggccaagaaagaagcttatcgctggaccgcgcagaatcagcctgaaacg
gtggctgagccagttaccacgcctaaggcattgcgctctgcgttagagcatgaaaaaaca
ccggagctttctgctaagttggctgaagaggctatggtgcgggatccttgggcggcagag
atagataagttgcatattccgaaattggtacagcaacttgcgctgaatgcatttaaagaa
gtaatagaaccgggtaatatctgccttcacctgcgttctagccagcgccatttaaattcg
ccctcggcacaaaaaacgctgggcgatgcattgagtgaattacacggtaatgctgtcaca
cttagcgttatcgaagatgacaacccggcggaacgtactccgctggaatggcggcaggcc
atttatgaagaaaaactggcacaagcacgccagtcgattattgcggataataatattcag
acactgcgtcgtttcttcgatgcagaattggatgaagagagtatccggccggtttaa
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