Yersinia intermedia: CH53_2947
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Entry
CH53_2947 CDS
T03608
Name
(GenBank) bacterial regulatory helix-turn-helix, lysR family protein
KO
K18900
LysR family transcriptional regulator, regulator for bpeEF and oprC
Organism
yin
Yersinia intermedia
Brite
KEGG Orthology (KO) [BR:
yin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
yin03000
]
CH53_2947
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
yin01504
]
CH53_2947
Transcription factors [BR:
yin03000
]
Prokaryotic type
Helix-turn-helix
LysR family
CH53_2947
Antimicrobial resistance genes [BR:
yin01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump BpeEF-OprC [MD:
M00698
]
CH53_2947
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HemN_C
TOE2_C
Motif
Other DBs
NCBI-ProteinID:
AJJ20465
LinkDB
All DBs
Position
complement(3320474..3321391)
Genome browser
AA seq
305 aa
AA seq
DB search
MDRIQAMQVFIRVAEAGSFVRAAETLSLPASTVTSTIKNLEKYLQVRLLNRTTRRVRLTP
EGLQYLAQCREILSLIEHTESSLTDSVRRPQGRLRIDMPGGIAHFIVMPNLKDFYRLYPD
IYLMIGVSDRQVDLVQEGVDCVIRTGELTDSTLVARPLGRFRWVTCASPDYLREYGIPET
PEALSQHRAIHYFSGSGRRTNELRFTRGTEMLSVPVEGDAAVNETGLYIRLCLEGFGLAQ
LAENVISENLQQGKLVEVLADWQPPSVPVTMLYPHQRFLSPAVRAFADWVAGLFNDGAGQ
KRSSL
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggatcggattcaggctatgcaggtttttataagagttgctgaagccggaagctttgtg
cgcgcggcagagacactgtcactgccagcttccaccgtcaccagcacgattaaaaatctg
gagaaatacctgcaggtgcgtctgcttaaccggacgacgaggcgggtcagactcactcct
gaaggcctgcagtatcttgcgcagtgccgggaaatcctttcactgattgaacacacggaa
tccagcctgaccgattccgtcaggcggccccaggggcgactgcggatagatatgcccggt
gggatcgcccattttatcgtcatgccgaatctgaaagatttttaccggctctatccggat
atttatctgatgattggcgtcagcgaccggcaggttgatcttgttcaggaaggtgtggat
tgcgtcatcagaaccggggaattaaccgactccacgctggttgcccgtccccttggccgg
tttcgctgggtgacctgtgcctcgccggactatctcagggagtacggtatccctgagacg
ccggaagcgttgtcgcagcatcgggcgatccattatttctccggttcgggaagacggacc
aatgaactgcgttttacgcgtggcactgagatgctttccgttccggtagaaggagacgca
gccgttaacgaaacgggactctatatcagactgtgtcttgagggttttgggctggcgcag
cttgctgagaatgtgatttcggagaatctgcagcaaggcaagctggtcgaggttctggcg
gactggcagccaccttcagtgccggtgacgatgctctatccgcatcagcgttttctctct
ccagcagtgcgtgcttttgctgactgggtcgccgggctttttaacgatggcgcaggtcaa
aaacggtcttctctgtaa
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