Yersinia intermedia: CH53_3012 Help Entry CH53_3012         CDS       T03608                                  Name (GenBank) AAA domain family protein   KO K07452   5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-] Organism yin  Yersinia intermedia Brite KEGG Orthology (KO) [BR:yin00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    02048 Prokaryotic defense system [BR:yin02048]     CH53_3012 Prokaryotic defense system [BR:yin02048]  Restriction and modification system (R-M system)   Type IV R-M system    CH53_3012 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_5 AAA AAA_19 AAA_22 AAA_25 DUF3960 Motif Other DBs NCBI-ProteinID:  AJJ18494 LinkDB All DBs Position complement(3382420..3385047) Genome browser AA seq 875 aa AA seqDB search MSEYSWIPVFKNVRNWIADYENKQQELVKILREIGVDKGLEDELSDGNREPLKVIDPFTF FATFMKYGVVKRTELFAALLERAGLPISAPSDFNGVPNAQPLKVWLFPYERERSADMVPS LWALFHQMHAGQINGDLFDKILNIPHTGFAKLTECLFYLSPEDYFPVDAQTKHWLKKKGR ELPKENWQSYQELLSWLDSTQSKSYYEISYEAWYENQSSAFSSVVADEYLSTRFPHIRSS TTHLIAYQTDARRSLAFDPGQNPEKKKKIKIFVDEQPTHPNLSQVIAYEIGKSRNHHLTT HAPILAKGNAAWAVEISTIEQLITLCDWYAPLPAKDLPAMENKEKSVKNHTSLNQILFGP PGTGKTYSTLERAVLLAEPSWYSDLKSQNLSAEQLRQEVKNKYETLCADKRIAFTTFHQS FSYEDFIEGIRAEVAEEHQGIKYKIEKGVFKEIADRAAKAVAAKEIGLSQAPDIWKISIG RAHEKEMRDRYINAGEARIGWNEAGDLTQTFEQKTQEQQDYWDSLSNPNHNALNAFSQDV KVGDVLLCLKNAETVQAVGVVTSDYSFDEDSEESGEYAHVRKVNWVLKDIELNILALNGS TKMVQQTLYPLYRISWHALIAELDKQRISLPPSFHEVSNVRERQNYILIIDEVNRGNISR IFGELITLLEPDKRQGGADERTVILPYSKELFAVPDNLYVIGTMNTADKSLAQLDLALRR RFEFVELMPQPDLLSGISVFGVNVGELLTVMNQRIEVLLDRDHTLGHAYFWPLMNAKSED EKRKLTADVFEKRIIPLLQEYFFADWERIGWVLNDSEKAPENRFIQTGNIERAIEGLFPE SIASQLNDRRYRINRSAFLKAASYQGIMPKGGVAS NT seq 2628 nt NT seq  +upstreamnt  +downstreamnt gtgtctgagtatagttggatccctgtatttaaaaacgttcgcaactggattgctgactac gagaataaacagcaagaattggtcaaaattctacgagaaataggcgttgataaaggtctg gaagacgaactttcggatggaaacagagaaccgctgaaagtgatagaccctttcactttc tttgccacttttatgaagtatggcgtggtcaaacgtactgagctctttgccgctctgctg gaaagagctggtttaccaatctccgcaccaagcgatttcaacggtgttccaaatgcacag ccactcaaagtctggctctttccttatgagagagaacgttctgccgacatggtgcccagt ctttgggcactatttcatcagatgcatgccggacaaatcaatggtgacctattcgacaaa attctgaatatccctcataccggtttcgccaaactcactgagtgtttgttttatttatca ccggaggattacttccctgtagatgctcagacaaagcactggctcaagaaaaaagggcgt gaactgcctaaagagaactggcaatcctaccaggagttgttgtcatggctggacagtacg cagtcaaaatcatattacgaaatatcgtatgaagcttggtatgaaaatcagagcagcgca ttctcttcggtagttgcagacgaatacttaagtacccgtttccctcatatacgatcgtca actacacatctgattgcttatcaaacggatgcaaggaggtcgctggcatttgatccaggt cagaaccccgagaaaaagaagaaaattaaaatatttgttgatgagcaacctacccacccg aacctttcccaagtcatcgcctatgagataggcaagagccgcaaccaccacctgacaaca cacgcgccaatccttgctaagggaaatgcggcatgggctgttgagattagcactattgag caattaattacactgtgtgattggtatgcacccctaccagcgaaggacctacctgccatg gaaaataaagagaaatcagtgaaaaatcacacatcacttaatcagattctttttggtccg cccggaactggtaaaacctactctacgctggaacgagcagttttgttggcagagccctct tggtatagcgatctgaaaagccagaatcttagtgctgagcagcttcgacaggaagtcaaa aacaaatacgaaacgttgtgtgctgacaaacgcatcgcgtttaccaccttccatcaaagt ttttcgtatgaggattttattgaggggatccgcgctgaggtagcagaggaacatcagggc ataaaatacaagatcgagaaaggtgttttcaaagaaattgctgaccgtgctgctaaggca gttgcagcaaaagagatcggactctctcaagcaccagatatttggaaaatctctattggt cgcgcccatgaaaaagaaatgcgtgatcgctacatcaacgcaggtgaagcacgtattggc tggaatgaagctggtgatttaactcagacctttgagcaaaagacacaggaacagcaggat tactgggactcattgagtaatcctaaccacaatgcccttaacgccttttcgcaagatgta aaggttggggatgttctgttgtgcctgaaaaatgcggaaaccgttcaggcagttggagtt gtcacctcagactattcatttgatgaagactctgaagagtcgggtgagtatgcgcatgtg cgcaaggtaaattgggtgttaaaggatattgaactgaacatccttgcacttaatggcagt acaaaaatggttcagcagacattgtatccactctatcggatcagttggcatgctttgatt gctgagttagataaacaacgtatttccctgcctccctcatttcatgaagtaagcaacgtc agagagcgccagaactacattctgattattgatgaggtgaaccgcggcaatatttcccgt atcttcggggagttgattacgttgctggaaccagacaagcggcaggggggggctgatgaa cgcacagtcatcctgccttattccaaagaattgttcgctgtgcctgacaacttgtatgtc attggcaccatgaatacggcagataagtcattagcccaacttgatctggcgttacgccgc cgttttgagtttgtagaactcatgccacagcccgatttactgtctggcatctcagtattt ggcgttaatgtcggtgaattgctgacagtaatgaatcaacgcatagaagtcttactcgat cgtgatcataccttagggcacgcgtacttctggccgctgatgaatgctaaatctgaggat gaaaaacgtaaactgactgctgatgtttttgagaaacgcatcattcccctgttgcaagag tatttttttgcagactgggaacgcataggttgggtactgaacgatagcgagaaagcacct gaaaacagatttatccagacaggtaatatcgaacgcgccattgaaggtttgttccccgag tccattgcaagccaattaaacgatcgcagataccggattaatcgaagtgctttcttgaag gccgcatcttatcaagggattatgcccaaaggtggagttgccagctga

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