Yersinia intermedia: CH53_3064
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Entry
CH53_3064 CDS
T03608
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
yin
Yersinia intermedia
Pathway
yin00550
Peptidoglycan biosynthesis
yin01100
Metabolic pathways
yin01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
yin00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CH53_3064 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CH53_3064 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
yin01011
]
CH53_3064 (mrdA)
Enzymes [BR:
yin01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
CH53_3064 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
yin01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
CH53_3064 (mrdA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
AJJ18996
UniProt:
A0A0T9MWM4
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All DBs
Position
complement(3435093..3436988)
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AA seq
631 aa
AA seq
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MKKEPNPFRDYSAESALFVRRALVAFLGILLLSGILIVNLYNLQIVRFEDYRTRSNENRI
KLVPIAPSRGMIFDRNGTPLAMNRTIYQLELMPEKIEDLPTTLNALRPIVDLTDEDIANF
EKERKRSRRFTSIAVKTPLTEVQVARFAVNQFRFPGIEVKGYQRRFYPYGSALTHVIGYV
SKINDKDVERLDKDGILANYAATHDIGKLGIERYYESVLHGKTGYEEVEVNNRGRVIRQL
HEQPPQAGKDIYLTLDLNLQTYIEKLLSGSRAAVVVTDPRTGAILALVSNPSYDPNLFVD
GISNKDYQGLLNDPDRPLINRATQGVYPPASTVKPYIAVSALSAGVITKNTSLFDPGWWQ
LPGSEKRFRDWKKWGHGRLNVTKALEESADTFFYQVSYDMGIDRLSSWMSKFGYGEYTGI
DLSEERAGLMPTREWKQKRHKKPWYQGDTIPVGIGQGYWTATPIQMAKALMTLINDGAVK
TPHLLQSTRIDGVLVPYQQEDRTQIGDIHSGYWEIAKDGMYGVANRPNGTGRKFFEGTPY
KAAAKSGTAQVYSYETYNAHKVAEHLRDHKLMVAFAPYENPTVSVAMILENGGAGPAVGT
ITRQILDHILLGDNNTELPDAAPLPPGVEAD
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagaacctaacccttttcgcgactattcggctgaatcagccttgtttgtccgc
cgcgcccttgtggctttcctcggtatcctgctgctaagcggaatattgatcgtaaacttg
tacaatttgcagatagtgcgtttcgaagactatcgcacccgttccaatgaaaaccgcatt
aagctggtccctatcgccccaagccgtggcatgatatttgatcgcaacggtaccccgttg
gcgatgaatcggaccatttatcaattagaattaatgccggaaaaaatcgaagacctcccc
acaacactcaatgcactacgcccgatagtggatctgacggatgaggatatcgctaatttt
gaaaaagagcgtaagcgctcacgccgctttacctccattgccgttaagacccctcttact
gaggtgcaggttgcccgtttcgccgttaaccaattccgcttccctggtatcgaagtcaaa
ggctatcaacgccgcttctatccctatggctcagccctgactcacgttatcggctatgta
tcgaaaattaacgataaagatgtcgaacggttggataaagacggcattttggctaactat
gccgcaacccacgatatcggcaagctgggtattgagcgctattatgaatccgtattgcac
ggcaaaaccggttatgaagaagttgaagtcaataaccgtggccgggtgatccgccaacta
catgagcagccgccgcaggccggtaaagatatttacctgacgctcgatttaaatctgcaa
acttatattgaaaaactcctgagtggcagccgcgccgcagtggtggtcaccgatccacgc
acaggtgcaatcttagcgttggtatcgaacccaagttatgacccgaacctatttgttgat
gggatctccaacaaagattatcaggggttactgaacgatcctgaccgtccgctgattaac
cgtgccactcagggcgtctacccccctgcgtctacagtaaaaccctatattgccgtttcc
gccctgagtgctggggttatcaccaagaacaccagcttgtttgaccctggttggtggcaa
ctgcctggctcagaaaaacgctttcgcgactggaagaaatggggccatggtcggctgaat
gtcaccaaggcgctggaggagtcggcggataccttcttctatcaggtttcctatgacatg
gggattgatcgcttgtcctcatggatgagtaaattcggctacggtgaatataccggtatc
gatctatccgaagagcgcgcgggcctaatgccaactcgtgagtggaaacaaaaacgccac
aaaaaaccgtggtaccaaggggataccattccagtaggtatcggccaagggtattggacc
gccaccccgatccaaatggcaaaagcgttaatgacgctgattaatgatggggcggttaaa
acgccacatctgctacaaagtacccggattgatggcgtgttagtgccttatcaacaagaa
gatcgcacgcaaattggtgatattcactccggttattgggaaatagctaaagatggcatg
tatggtgtagccaaccgcccgaacggtacggggcgtaagttttttgaaggtacaccttat
aaagcagcggcaaaatccggtaccgcgcaggtttatagctatgaaacctataatgcccat
aaagtggcggaacacttacgtgaccataaattgatggttgcgtttgcgccttacgaaaat
ccaacggtatctgtcgccatgattttagaaaatggaggtgccgggcctgcggtggggact
attacccgccaaatactcgaccacattttgttgggtgataataatactgaattaccggat
gcggcccctctgcctccaggtgttgaagcagattaa
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