Yersinia intermedia: CH53_3068
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Entry
CH53_3068 CDS
T03608
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
yin
Yersinia intermedia
Pathway
yin03030
DNA replication
yin03430
Mismatch repair
yin03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
yin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CH53_3068 (holA)
03430 Mismatch repair
CH53_3068 (holA)
03440 Homologous recombination
CH53_3068 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
yin03032
]
CH53_3068 (holA)
03400 DNA repair and recombination proteins [BR:
yin03400
]
CH53_3068 (holA)
Enzymes [BR:
yin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CH53_3068 (holA)
DNA replication proteins [BR:
yin03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CH53_3068 (holA)
DNA repair and recombination proteins [BR:
yin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CH53_3068 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
AJJ20754
UniProt:
A0A209A861
LinkDB
All DBs
Position
complement(3438922..3439956)
Genome browser
AA seq
344 aa
AA seq
DB search
MIRVYPEQLVAQLHEGLRACYLLCGNEPLLLQESQDHIRRVAIEHDFTEHFSFALDAHTE
WDSIFSLCQALSLFASRQTLTLSFPDSGLTAPMNEQLVKLSSLLHPDILLILRANKLTKA
QENSAWFKALGSNGVFVSCQTPEQAQLPRWVSTRAKSLNLEADDPAIQLLCYCYEGNLLA
LSQALERLSLLYPDGKLTLPKVEQAVNDAAHFTPYHWLDALIAGKSKRAWHILQQLQQEE
SEPIILLRTLQRELLLLLTLKRRMNQVPLRTLFDQLKVWQNRRPMMTQALQRLSLPQLQQ
AVHLLAQIEVRLKQDYGQSIWPELETLSMLMCGKILPESFFDAQ
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgatccgagtctatcctgaacaacttgtcgcgcagctccatgaggggctgcgcgcttgc
tatctgttgtgcggtaatgagccattgctgttacaagaaagtcaggaccacattcgtcgg
gtggcaatagaacatgatttcaccgaacatttcagttttgcgctagatgctcacaccgag
tgggacagtatctttagtctttgtcaggcactcagcctatttgccagccgccaaacattg
acactgagtttccctgacagtggtttaacagcaccaatgaacgaacagttggtcaagtta
tcaagtctgttacatccagatattttattgattttacgcgcaaataaactcaccaaagca
caagaaaacagtgcctggtttaaagcactcgggagcaatggcgtatttgtcagttgccaa
acaccggaacaggcacaactgccacgttgggtcagtacgcgcgctaaaagcctgaacctg
gaggccgatgaccccgccattcagttgctttgttactgctacgaaggcaatctactggcg
ctatcacaagctttggagcgtttatcgttactctatcctgacggtaaactgacgctgcct
aaagttgagcaagccgtcaacgatgccgcgcatttcaccccttaccactggctcgatgcc
ctaatagcagggaaaagcaaacgcgcctggcatatcctgcaacaattgcagcaggaagag
agtgaaccgattattttgctgcgcaccttgcagcgagaactgctattgctgttaacgtta
aagcggcgaatgaatcaggtgccactgcgcacactatttgatcagttaaaagtatggcaa
aatcgccggcccatgatgacgcaggctctacaacgcctttccctgccacaattgcaacaa
gccgttcatttgctggcacaaattgaagttcgcctgaaacaagattatggtcagtcaatc
tggccggaattagaaacactgtctatgctgatgtgcggcaaaatattacctgagagcttt
tttgatgcccaataa
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