Yersinia intermedia: CH53_3110 Help Entry CH53_3110         CDS       T03608                                  Name (GenBank) hypothetical protein   KO K15125   filamentous hemagglutinin Organism yin  Yersinia intermedia Brite KEGG Orthology (KO) [BR:yin00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:yin00536]     CH53_3110 Glycosaminoglycan binding proteins [BR:yin00536]  Heparan sulfate / Heparin   Microbial pathogens    CH53_3110 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Fil_haemagg_2 TPS Deam_C PT-VENN ESPR MafB19-deam Fil_haemagg DUF6862 Motif Other DBs NCBI-ProteinID:  AJJ17167 LinkDB All DBs Position 3482574..3492077 Genome browser AA seq 3167 aa AA seqDB search MNKNLYRIVFNKARGLLMVVADIAASGRAASSPSSGVGHTQRRRLSTLSPLSFSLLLAFG CVSLSAQATIVADASVPGNQQPTIINSANGTPQVNIQTPSSGGVSRNVYSQFDVDNRGVI LNNGQGVNQTQLGGFVSGNPSLARGEASIILNEVNSRAPSRLNGYIEVAGRKAQVVIANP SGITCEGCGFINANRATLTTGQAQLNNGQLTGYDVDRGEIVIQGKGLDSSRQDHTDLIAR SVKVNAGIWANDLKVTAGRNQVDAAHQNINAKAADGSPHPTVAVDVASLGGMYAGKIRLI GTESGVGVRNAGEIGASAGDISITADGMLVNSGQINSAQHLAVNTAAGIANAGVLYAQGN TQLTTAGTLNNTGTVAAAGDTSLRAVEVNSSRNSLLGAGVKSDNSSVTSGTLSIDASGQL IAQGKNISGTAQNLNAHSIDLSGSQTQSRDITLTTQGGAIDLTDANLSASQHLSASTAAQ LRTDSARLIADQVTLNAQSLSNVGGVIAQTGTTDFNLTLPGDIDNRGGTLLSGGKLSLQA ENLNSNGNSLLGAGVQSDGKLAQSGSLNVATRQALIAQGQNVAAQDMTLTGSRVDLTGSQ TQAGNITITARDGDVSTQDATVLTPGTLAITAAANPKQTLNNSGGKLHADNIQLNLAKLD NSKGEIAAATDLWIRLQSDFTHQAGARLTAGRDLVFSSTGSLINQYKLEAGRDMQLTALS ISNTNTDDSSALLAGRDMALSTDSLFNRGAIYATGVGQFTVNGNVENRGEIYTEQQLTFT TTGNLANRGVMQTRGDMRLSTQGDLNNSGTLYSGGDQMQVLTTGNLTNQGKLYAANGNVH LRAEGYLDNSGSLYSAGNSELITHGDAVNSGSIYAQGALQWQADGRVGNSGSIAALRDLQ LRANDLFSAHQSLIGAGLQSDGNRASSGDLTVSTEHALIAQGQNMAAGALALSGSQLDLT GSQTQANTINFVAKSGDITLTEAVVKAATQLSASTTALLRTDKANLMAERVTLSAQSLSN LGGVIAQTGIMDFTLNLAGYLDNRAGTLLSKGNVTVQTDRLDSDGDSLLGAGVQSNGRLT DTGDLVVATGQDLNAQGQNIAAGAITLTGSRIDLTGSQTQAREINITANSGDISTQRANI LSLGTLTITAGANAGQTLHNQGGALAANNISLNLGQFDGSAGKVSASQDLTIGLLSDFNN LAGSTLQAGRDLTLSTDGTLTNDGQLLAGGKLSTHSVSLLNNGNISATQASLTATGALTN RGEILTRGRLDTDSNTLFNTGSLISAEATLKARERITNSGPNALMGATDENGTLALLAPV IENSDLVTSTDTAPTTTLLGMGKVILAGGQDKGGNYLTAAQILNISGLIESGKDMLIYAT TLTNRRHILTANTQFVTGNTVSGSAYWSPTNPDVPGGRYAEPPHGGSMNSDYIGTNYTST YAYNGIDQISPEAHLLAGGNLTPQVGTLENFWSKVSAQGEIDLSGVTLNQDGWGNAQRLI ERTTSSGEWRYRTYKGNLWGTAWGPEVREHTTNQYASSLTAKTLSGSGTTINNGANPGAI APPSGRDHTGKDLAVEFNGISLTLPNGGLYQLNTDKGHYAPDPEGKLSFDSINTPSANVD RTGLTAPDRAVSGGYLVETNPAFANLNNWRGSDYVLQQLNNDPDVIFKRLGDNAYEQRLV RDQVLALTGQAVASDYRSAQEQFEQLFAAGLQYSKTFNLALGTHLSAEQMAALTHNIVLM ESRDVAGQTVLVPVVYLAGVKPGDLQANGALIAANNIELTDMQGLTNQGAIKASNDLRIN MAKDITLTSNGGLLQAGGNMQLSTLNSDIDLTGTRLNATNLQLDSGRDVILRTSSEQLSS GNGAVLRNQTILGPLASINVSNNAAINTGRDFILQGAGLNVGKDLQVNTGGDWILNTVQS SDQISANYGYGSSTSEHIRHLGSEVNVGGALIAKVDNLTAVGANINAGTVDVQAQNINLS AATDSLHVTGESSSKRHTSSVDLYDETLRGSQLNATGDINLQAVKDINISASAVQTDGAL KLAAGGDVTLTTQTEQHDEQRNHTGISKELASTTTTRTEDSISQTLAIGSMLSAGSIDVS GNNIAVTGSNVVADNDINLRAKENITVGTAQQSESESHLFEQKKSGLMTTGGIGVTVGSN SQKTTDTGKSISNVGSTVGSLGGNVTLDAGNQLTIHGSEVIANKDISLQGSDVAITAAEN NLSQQHTTESKQSGITVALSGAVGSAVNTAVTTAQDAKKETNGRLAALQGTKAALSGIQA VQAGQLAQAQGGDAASMVGISISLGSQKSSSQQHQEQTRVSGSTLTAGNNLTINATGKGS SANSGDILIAGSQLKAGGDTTLDAARDVLLLGAANTQKTDGSNSSSGGSVGVSLGFGSAG GGLSIFANANKGQGNEHGDGTFWTETQIDTGGTLSLSSGRDTSLIGAQASGETVKVDVGR DLLLQSQQDSDNYDAKQTSTSGGVSMAVVGGGGSANLSISKDKLHSNYDSVQEQTGIFAG KGGFDVKVGEHTQLDGAVIASTADKSKNSLDTGTLGFSNIENKADFKAEHQGGSLSTGGP VGSDLLSNLGSVVLSGLGNDGHADGTTQSAVSDGTITIRDTGKQQQNVDDLSRDTDNANG SIGPIFDKEKEQNRLREAQLIGEIGGQAMDIVRTQGDIIGLEAALKANPTLKGNAEALRE TKEYKAEMQKYGTGSALQQGLQAATAAVQGLAGGDMAKALAGASAPYLAEVIHNMTTDAN GKVNTEANLMAHAVLGAVVAQVNGNSALAGASGAAMGEYIAQQMYPGINREDLTEEQRQT ISALGTLAAGLAGGVVGNSTADAVAGAQAGKNAVENNYLSSTEKSRQTYLNNKQNLTPEE QKDKEALNRKDLESDLAAYAACSGKGGDCQVERAKAKDAQDTYFNQTYQNPKEAQAGYQQ IMNLLNSTDPNAKEVFNILEGYTQAFMSFGYTEDEAKARAGAYVGSMYIAGGVSAVVASG ALTKQFGKDVASGTKPGNSTAKPTVTAELEINGQKFKDTNQTARPVDQANKNEATLIADR VASKEQNLIDKGKTGNLPLPNSNMANAHAEIGVIQQAYNAGKTQDANLTINVVGKDVCSY CKGDIAAAAQASGAKSVTVNAIDNKTGLPKSYIWELGMKSIKEIKKQ NT seq 9504 nt NT seq  +upstreamnt  +downstreamnt atgaataagaacctgtaccgtatcgttttcaacaaagcgcgtggcttattaatggtggtg gccgatatcgccgcctccggtcgggccgcctcgtcgccgtcgtccggtgttgggcatact cagcgccgccgtctcagtaccttatcgccattgagttttagtctgttactggcgttcggc tgcgtctcgttatccgcgcaggccactattgtcgccgatgccagtgtgccggggaaccag caaccgaccattatcaacagcgccaacggtacgccacaggtcaatatccagacgcccagc agtggcggtgtttcgcgtaacgtttacagccagtttgatgtcgataatcgtggcgtgatc ctcaataacggtcagggtgtcaaccagacccaactcggcggttttgtcagcggtaacccc tcactggcacgcggtgaagccagtattatcctcaatgaagtcaacagccgcgcccccagc agactcaacggttatatcgaggtggccgggcgcaaagcacaggtggttatcgccaaccca tcgggcattacctgcgaaggctgtggttttattaatgccaaccgcgcgaccttaactacc ggtcaggcacaactcaataacggccagctcactggctacgatgtggatcggggtgagatt gttattcagggcaaaggtctggacagcagccgtcaggaccataccgatctgattgcccgt tcggttaaagtgaatgccggtatctgggccaatgatctaaaagtcactgccgggcgcaat caggttgacgccgcgcaccagaacatcaatgccaaagccgccgatggcagcccgcaccct accgtggcggtggatgtggcgagtttaggcggcatgtatgcgggtaaaattcgcctgatt ggcactgaaagcggtgtcggggtgcgtaatgcgggtgaaataggcgcgtcagccggcgat atctccattacagccgacggtatgctggtcaacagcggccagatcaacagtgctcagcat ctggcggtgaataccgccgccggtatagcgaacgccggtgtgctttatgcgcagggcaat acccagctcaccaccgcaggcacgttgaataacaccggcactgtcgcggcggcaggtgat acttcgctgcgcgcggtagaagtgaacagcagccgtaattctctcttgggtgcgggcgtc aaatccgacaacagcagtgttaccagcggcactcttagcattgatgccagcgggcagcta atcgcccaagggaaaaatatcagtggtacggcgcagaatctcaacgcgcacagtatcgat ctcagtggcagccaaactcaaagccgtgatatcacattgaccacccaaggtggcgctatc gatctcactgacgcgaacctgtccgccagccaacacctgtctgcctcaaccgccgcacaa ttacgtaccgacagcgcccgcctgattgcagatcaagtgacgctgaacgcccaatcgctc tccaatgtcggcggggtaatagcgcaaaccggtaccacggacttcaatctgactctgccg ggtgatattgataaccggggcggcaccttgctctctggcggaaaactctcactgcaagct gaaaacctgaacagcaacggcaacagcctgttgggtgcaggtgtacaaagcgatggcaaa ctggcccaaagcggctcgctgaatgtcgctacgcggcaagcattgattgctcaggggcag aacgtcgcagcacaagacatgacgctaaccggcagccgtgttgatctcaccggtagccaa actcaggctggcaatatcactataacggcccgcgacggcgatgtttctacgcaagacgcg acggtgctcactcccggaacccttgcgatcaccgccgcagcaaatccgaaacaaaccctg aataacagtggcggtaaattgcatgccgataatatccagctcaatctggccaaattggat aacagcaaaggggaaattgcggcagcgaccgacctgtggatacgcctgcaaagtgatttc actcatcaggctggcgcacgtttaacggcggggcgtgatctggtgttcagttccaccggt tccctgattaaccaatacaaactggaagccgggcgggatatgcagctcaccgcgctcagt atcagcaacaccaatactgatgacagtagcgccctgctggcggggcgtgacatggccttg agcaccgacagtctgtttaaccggggtgctatctatgccaccggtgtcgggcaatttacg gttaacggcaatgttgagaaccgcggtgagatttataccgaacagcaactgacgttcacc accaccggcaatctggctaaccgcggtgtgatgcaaacgcgcggtgatatgcggttatcg acgcagggcgacctcaataacagtggcacgctatacagtggcggtgaccagatgcaggtg ttaaccaccggtaatctaaccaatcagggtaagctgtacgccgccaatggcaacgtccac ctgcgggcagaaggttatcttgataacagcggcagcctgtatagtgcaggcaacagcgaa ctcattacgcacggcgacgcggttaacagcggctcaatttatgctcagggcgcactgcag tggcaggctgatgggcgcgtaggcaacagtggttcaatcgccgcacttagggatctccaa ctgcgcgctaatgacttatttagcgcccatcaatccctgataggggcgggattgcaatct gacggcaaccgcgccagcagcggtgatttgacggtcagcactgaacacgccttgatagca caagggcaaaacatggccgccggtgcattggcgctatcggggagccaacttgatctcact ggcagccagactcaggccaacaccatcaactttgtggctaaatctggcgatatcacctta acggaggccgtggtaaaagcggccacgcaactgtcggccagcaccaccgccctgctgcgc accgataaggccaacctgatggcggagagggtcacacttagcgcccaatcgctctccaat ctcggcggggtgatagcgcaaaccggtatcatggatttcaccctcaatttggctggctat ctggataaccgcgcgggcacgctgctctccaaaggtaacgtgacggtacaaacggatcgc cttgacagtgacggcgacagtctcttgggcgcaggtgtgcagagtaatggccgcctgacg gataccggtgacttggtggtggcaaccggtcaggatttgaatgcgcaagggcaaaatatc gccgccggtgccataacgttaaccggtagccggattgatttgaccggtagtcagacccaa gcccgcgagataaacatcaccgccaacagtggtgacatcagcacgcagcgcgccaatatt ctctcccttggaacgctgaccattactgcgggggcaaatgccgggcaaaccctccataac cagggcggtgcgctggcggcgaataatatctcgttgaatcttggtcagtttgatggcagc gcaggtaaagtcagtgccagtcaggatctgactattggtttactgagtgatttcaataat ctggccggttcgacacttcaggccgggcgtgatttaaccttgagcactgacggcacgtta accaatgacgggcagttattagcgggcggcaaactcagcacccactcggtcagtttattg aataacggcaatatcagtgcgacccaagccagcctcaccgcgacgggcgcattgacgaac cgtggcgagatcttaacccgtggtcggctcgataccgactccaacaccctgttcaacacc ggctccctgatcagtgcagaagccacgctgaaagcgcgggagcgtatcaccaactctggc cctaacgccctgatgggtgccaccgatgaaaatggcacgctagccctgctggcaccggtg attgagaacagtgatctcgtcacgagcactgacactgccccgaccaccacccttttaggg atgggcaaggtcattctggcgggcgggcaagataagggcggaaattacctgacggcggct cagatcctcaacatttccggtctgatcgaatccggcaaagatatgttgatttacgccacg acactgaccaatcgccgccatattctcaccgccaatacacaatttgtgacgggcaatacc gttagcggatcagcttactggtcgccaaccaatcctgatgtaccgggtggtcgctatgct gaaccacctcatggcggctcgatgaacagtgattatattggcactaattatacgtcgact tacgcctataacggcattgatcaaattagccctgaggcacacctgttagcgggggggaac ctgaccccgcaggtgggcacgctggaaaacttctggagtaaagtgagtgcgcagggagag attgatctttcgggtgtcaccctgaaccaggatggttgggggaatgcacaacgcctgatt gaacggacgacatccagcggtgagtggcgctaccgtacctacaaaggcaatttgtggggc acggcgtgggggccggaggtcagagagcacaccaccaaccaatatgcctccagtcttacg gcgaaaaccctgagtggcagcggcacaacgatcaacaatggggccaaccccggtgctatt gcgccgccgagtggtcgcgaccataccggtaaagatctcgccgtcgagtttaacggtatt tcgttgacactccccaatggcgggctatatcagctcaacacagataaaggtcactacgcg ccggatccggaaggcaaactttcgttcgacagtatcaataccccctccgccaacgtggat cgcactggcctcaccgcccctgatcgggcggtaagtggcggctatctggtggaaactaac ccggcgtttgccaatcttaataactggcgcgggtcagattatgtactccagcagttgaat aacgacccggatgtgatattcaaacgtttgggggataacgcctacgaacaacgtctggtg cgggatcaggtgttggcgctgaccggtcaggcagtcgccagtgattaccgtagcgctcag gagcagttcgaacagctctttgcagcggggctccagtacagcaagacgttcaatcttgcc cttggcacccacctcagtgcggaacagatggcggcattgacccacaatatcgtgctgatg gaaagccgtgacgttgccgggcaaaccgtgctggtaccggtggtctatctggcaggcgtc aaaccgggtgacttacaggccaacggggccttgattgccgctaataatatcgaactcacc gatatgcaggggttaaccaatcagggggcgattaaagccagcaatgacctgcgcattaac atggcaaaagatatcaccctgaccagcaatggcggcttacttcaggccggtggcaacatg cagctcagtacattgaacagtgatattgacctgactggtacgcggctaaatgccactaac ctgcaactggatagcgggcgcgatgtgatcctgcgcaccagcagtgagcaactcagtagc ggtaatggcgctgtgctgcgtaatcaaacgattttggggccgctggcgagcattaatgtc agtaataacgccgctatcaataccggtcgtgattttatcctgcaaggcgctggcctcaat gtcggcaaggatcttcaggtcaataccggcggcgactggatcctcaataccgtgcaaagc agcgaccagataagtgcgaattatggttatggcagttcgaccagtgagcatatccgccat ctgggcagcgaggtgaatgtcggtggtgcgttgatcgctaaagtagacaacctcactgcg gtgggggctaacatcaatgcaggcacagtggatgtgcaggcacaaaacattaacctgagt gcggcgaccgacagcctgcacgtcaccggtgaatcctcgagcaagcgccataccagttcc gtggatctctacgatgaaaccctgcgtggtagccagttgaatgccactggcgacatcaat ttgcaggcagtaaaagacatcaatatcagtgccagtgcggtacaaaccgacggtgcgctg aagctggcggcgggcggggatgtcacgctcaccacccagactgaacagcatgatgaacag cgcaatcatactggcatcagcaaagagctggcatcgacgaccaccacacgtaccgaagac agtattagccagacactggcgatcggctcgatgctgtcagcgggttctatcgatgtcagc ggcaacaatatcgcggtcaccggcagtaacgtggtggccgataacgatattaacctgcgg gcaaaagaaaacattaccgtgggcaccgcgcaacagagcgagagcgagtctcacctgttc gagcagaaaaaatcgggcctgatgaccaccggtgggataggtgtcacggtggggagtaat agccagaaaacgactgacaccggcaaatccatctccaacgtgggcagcacggtgggcagt ctggggggcaatgtcactcttgatgcgggaaatcagttaactattcacggcagcgaagtg atcgccaataaagacatcagcctgcaagggtcagatgtcgcgataactgctgcggaaaac aacctgtcccaacaacataccaccgagagtaaacagagtggcatcaccgttgccctgtct ggcgcggtcggcagtgcggtcaataccgcggtcactaccgcacaggacgccaaaaaagag accaacgggagactggctgccttgcagggcaccaaagcggcgctatcgggtattcaggcg gtgcaggccggtcaactggcgcaggcacaaggcggtgatgccgccagcatggtgggtatc agtatttcattagggtcacagaaatcgtcctcgcaacaacatcaggaacagacccgtgtg agtggttcgaccctgacggcgggcaataatctgaccatcaatgcgaccggaaaaggcagc tcggcgaacagcggcgatatcctgattgcaggcagccagctcaaagccggtggcgacacc accctggatgcggcgcgtgatgtgctgttgctcggtgccgccaacacacagaaaaccgac ggcagcaacagcagcagcggtggcagtgtgggagtcagtctggggttcggtagcgctggc ggtggtctgagcatctttgccaatgccaacaagggtcagggcaatgagcacggcgacggc accttctggactgaaacgcagattgacacaggcggcacactgtcactcagcagcgggcgt gacacttcgctgataggcgcgcaagccagcggtgaaaccgtcaaagtggatgtcggccgt gacctgttactgcaaagccagcaagacagcgataactatgatgcgaagcagaccagtacc agcggcggtgtcagcatggcggtggtcggcggcggtggctctgccaacctgagcatcagt aaagacaagctgcacagcaattatgacagtgtgcaggagcagacgggtatctttgcaggc aaaggcggctttgatgttaaggtcggcgagcatacccagctcgatggcgcagtgattgcc agcaccgcagacaagagcaaaaacagtctggataccggtacgctgggcttcagtaacatc gaaaacaaagctgatttcaaagccgagcatcagggcggcagcctgagtaccggtggtccg gtggggtctgacctgctgagtaatctggggagtgtggtgctttcagggctgggcaatgat ggtcatgccgatggtactacgcaatcggcggtcagcgatggcactatcactatccgcgat accggtaaacagcagcagaatgtcgatgacctgagccgtgataccgacaacgccaacggc agcatcggccctatctttgataaagagaaagagcagaaccggctgcgagaagcgcagctt attggcgagattggtggtcaggcgatggatatcgtgcggacgcaaggggatatcatcggt ctggaagccgcgctgaaggccaatccgacgttgaaaggcaatgcggaagccttgcgtgag acaaaagaatacaaagccgaaatgcagaaatacggcaccggcagtgcgctgcaacaaggt cttcaggcagcaacagcggccgtacaaggcttggccggtggtgatatggcgaaagcgctg gcgggagcctctgcaccttatctggctgaagtcattcacaatatgactaccgatgccaac ggcaaggtcaacactgaagccaacctaatggcccatgcggtattgggtgcagtcgtggca caggtaaacggcaacagtgcactggcgggcgcttcgggtgcagcgatgggtgagtatata gcccaacagatgtatccggggattaatcgtgaagacttgaccgaagagcaacgacaaacc atcagtgccttgggtacactggcggcaggattggccgggggcgtggtgggtaatagcact gctgacgccgttgccggggcgcaggctgggaagaatgctgtggagaataactatctgagc agcacggaaaagagccgccagacatatctcaacaacaaacagaacctgacaccagaagaa cagaaagataaggaggcgttaaatcgcaaggatctggaaagtgatctggctgcttacgcg gcctgcagtggcaaaggtggtgactgtcaggtagaaagagcaaaagcgaaggacgcgcaa gatacctacttcaatcagacctaccagaatccgaaagaggcccaggcggggtatcagcag ataatgaacttgctgaactcaacagacccgaatgcgaaggaagtgtttaacattctggaa gggtatacgcaggcgttcatgtcgtttgggtacactgaggatgaagccaaagcgagagca ggagcctatgttggttccatgtatatcgcgggtggtgtgagtgcagtagtggcatctgga gcactgacgaaacagtttgggaaggatgtagcgtcgggtacgaaacctggaaactcaacg gcaaaaccaacagtaactgcggagttggaaattaatggtcaaaagtttaaagatacaaat caaacagcaagaccggtagatcaagcgaacaaaaatgaagctacattaatagctgataga gtcgcaagcaaagaacagaatctgatagataagggaaaaacagggaatttacctctgcca aacagcaacatggctaatgctcatgctgagataggtgttatacagcaagcttataatgcc ggtaaaacccaagatgctaacctaacgatcaatgtggtaggcaaagatgtttgtagttat tgcaaaggtgatatagccgcagcagctcaagcttctggagcaaaatcggtcacggtaaat gccattgataataagacagggttaccaaagagttacatatgggaacttggtatgaaatca atcaaggaaattaaaaaacaatga

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