Yersinia intermedia: CH53_3140
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Entry
CH53_3140 CDS
T03608
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase, flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
yin
Yersinia intermedia
Pathway
yin00020
Citrate cycle (TCA cycle)
yin00190
Oxidative phosphorylation
yin00650
Butanoate metabolism
yin00720
Other carbon fixation pathways
yin01100
Metabolic pathways
yin01110
Biosynthesis of secondary metabolites
yin01120
Microbial metabolism in diverse environments
yin01200
Carbon metabolism
Module
yin_M00009
Citrate cycle (TCA cycle, Krebs cycle)
yin_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
yin_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
yin00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
CH53_3140 (sdhA)
00650 Butanoate metabolism
CH53_3140 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
CH53_3140 (sdhA)
00720 Other carbon fixation pathways
CH53_3140 (sdhA)
Enzymes [BR:
yin01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
CH53_3140 (sdhA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
GIDA
Pyr_redox_2
DAO
FAD_oxidored
Thi4
FAD_binding_3
BEX
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
AJJ21057
UniProt:
A0A0T9N0P4
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All DBs
Position
3521091..3522857
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AA seq
588 aa
AA seq
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MKLPVREFDAVVVGAGGAGMRAALQISQMGLSCALISKVFPTRSHTVSAQGGITVALGNT
HEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAVLELEHMGLPFSRLEDGSIYQRPFG
GQSRNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAFVGC
TAICIETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMALRAGVPVQDMEMWQ
FHPTGIAGAGVLVTEGCRGEGGYLLNKHGERFMERYAPNAKDLAGRDVVARSIMIEIREG
RGCDGPWGPHAKLKLDHLGKDVLESRLPGILELSRTFAHVDPIKEPIPVIPTCHYMMGGI
PTKVTGQAITVNEKGEDVVIPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGMHLQ
ESLLEQGASRDASESDIEASLARMNRWNNTRSGEDPVEIRKALQSCMQHNFSVFREGDAM
AKGLEELKTIRERLQNARLDDTSSEFNTQRIECLELDNLMETAFSTAVSANFRTESRGAH
SRFDFPDRDDANWLCHSLYLPGTESMTRREVNMQPKLRAAFPPKVRSY
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgccggtcagagagtttgacgctgttgttgtcggtgcaggtggtgcaggtatg
cgcgccgcactgcaaatttcacaaatggggctgtcttgtgccctgatatctaaagttttc
cctacccgttctcatacggtatctgcgcagggcggtattaccgtggcgctgggtaatacc
catgaagataactgggaatggcatatgtatgacacggtaaaaggctccgattatatcggt
gaccaggatgccattgaatatatgtgtaaaaccggtccagaagcggtacttgaactggaa
catatggggttacctttctcccgtttagaagatggcagcatttatcagcggccattcggt
gggcaatcgcgcaactttggcggtgagcaggcggcgcgtactgcggcagccgctgaccgt
accggccatgcgctattacacaccctttatcagcaaaacctgaaaaaccacaccactatc
ttctctgagtggtatgccctggatctggtgaaaaatcaggatggcgcctttgttggctgt
acggctatctgtattgaaaccggtgaagtggtctatttcaaagcgcgggcaacggtgttg
gccaccggtggtgccgggcgtatctatcaatcaaccaccaatgcgcacattaatactggt
gacggcgtgggcatggcactgcgtgccggtgtgccggtgcaagatatggaaatgtggcag
ttccacccgacaggcattgccggggcgggggtgttggttactgaaggttgccgtggtgaa
ggcggttatctgctgaataaacacggtgaacgttttatggaacgttatgccccgaacgcc
aaagatttggcgggtcgtgacgtagtggcacgttccattatgattgaaatccgtgaaggt
cgtggctgtgatggtccttggggcccgcatgccaaactgaaattagatcacttgggtaaa
gatgtgctggaatcccgcttgccgggcatccttgagttatctcgcacctttgctcatgtt
gacccaatcaaagagcctattcctgttatcccaacctgccattacatgatgggcggtatt
ccgaccaaagtgaccggtcaggcaattactgtaaatgaaaagggtgaagatgttgttatc
cctggcttgtttgcggtaggtgaaattgcctgtgtttccgtccacggtgccaaccgtctg
ggtggcaactcattgctggacctggtggtgtttggtcgtgccgccggtatgcatctgcaa
gagtcgttactggagcagggggctagccgcgatgccagtgaatcagatattgaagcctca
ctggcgcgaatgaaccgttggaacaatacccgttcaggcgaagatccagtcgagatccgc
aaagcactgcaatcttgcatgcagcataacttctcggtattccgtgaaggtgatgcaatg
gcaaaagggttggaagagctaaaaactatccgtgaacgtctgcaaaatgcccgtctggat
gacacttctagtgagttcaatacccagcgtattgaatgcctggaattggataatctgatg
gaaactgcgttttccactgccgtatcagcaaacttccgtaccgaaagtcgtggtgctcat
agccgtttcgacttcccagaccgtgatgatgctaactggttgtgccattcgctctatttg
ccaggcactgaaagcatgacccgccgtgaggtaaacatgcagcctaagctacgcgcggca
ttcccgccgaaagtgcgttcttattaa
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