Yersinia intermedia: CH53_3145
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Entry
CH53_3145 CDS
T03608
Symbol
sucD
Name
(GenBank) succinyl-CoA ligase [ADP-forming] subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
yin
Yersinia intermedia
Pathway
yin00020
Citrate cycle (TCA cycle)
yin00640
Propanoate metabolism
yin00660
C5-Branched dibasic acid metabolism
yin00720
Other carbon fixation pathways
yin01100
Metabolic pathways
yin01110
Biosynthesis of secondary metabolites
yin01120
Microbial metabolism in diverse environments
yin01200
Carbon metabolism
Module
yin_M00009
Citrate cycle (TCA cycle, Krebs cycle)
yin_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
yin00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
CH53_3145 (sucD)
00640 Propanoate metabolism
CH53_3145 (sucD)
00660 C5-Branched dibasic acid metabolism
CH53_3145 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
CH53_3145 (sucD)
Enzymes [BR:
yin01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
CH53_3145 (sucD)
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GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
AJJ18736
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All DBs
Position
3529282..3530154
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AA seq
290 aa
AA seq
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MSILIDKNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGTEHLGLPVFNTVREA
VEATGATASVIYVPAPFCKDSILEAIDAGIKLIICITEGIPTLDMLVVKVRLEQSDARMI
GPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDIGFGQSTCVGIGG
DPIPGSNFIDILKLFQEDPQTEVIVMIGEIGGNAEEEAAAYIKDHVTKPVVGYIAGVTAP
KGKRMGHAGAIIAGGKGTADDKFAALEAAGVKTVRSLAEIGNAVKAVLPQ
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgtctattttaattgataaaaacaccaaagttatttgccagggctttaccggtagccag
gggactttccactccgaacaagctattgcctatggtacaaaaatggttggcggtgttacg
ccaggtaaaggcggcactgagcatctgggcctgccagtattcaatactgtgcgtgaagcc
gtagaggccaccggtgctacggcatcggttatctacgtgccagcgccgttctgtaaagac
tccattcttgaagctatcgatgcgggtatcaaactgatcatctgtattactgaaggtatc
ccaacactggatatgctggtagtaaaagtcagattagaacagtctgatgcacggatgatc
ggcccgaactgcccaggtgttatcaccccaggtgaatgtaagattggcatcatgccaggc
cacattcatttaccgggcaaagtgggtattgtttcccgttcagggactttgacctacgaa
gcggtaaaacaaaccacggatatcggtttcggtcagtcaacttgtgttggcatcggtggt
gacccgatcccaggttctaactttattgatatcctgaagttgttccaggaagacccgcag
actgaagttattgtgatgatcggtgagatcggtggtaacgctgaagaagaagcggctgct
tatattaaagatcacgtgaccaaacctgttgtgggttacatcgccggtgtaactgcacca
aaaggcaagcgtatgggccacgcaggcgccatcattgcgggtggtaaaggtactgcggat
gacaagttcgctgcgctggaagctgccggtgtgaaaactgtccgtagtctggctgaaatc
ggcaatgccgttaaagctgtgttaccgcagtaa
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