Yersinia intermedia: CH53_3274
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Entry
CH53_3274 CDS
T03608
Name
(GenBank) AAA domain family protein
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
yin
Yersinia intermedia
Brite
KEGG Orthology (KO) [BR:
yin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
yin03000
]
CH53_3274
Transcription factors [BR:
yin03000
]
Prokaryotic type
Helix-turn-helix
Other families
CH53_3274
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
GAF_2
AAA_5
GAF_3
Mg_chelatase
AAA_2
AAA
HTH_8
AAA_16
AAA_7
MCM
Motif
Other DBs
NCBI-ProteinID:
AJJ21134
LinkDB
All DBs
Position
3664695..3666854
Genome browser
AA seq
719 aa
AA seq
DB search
MDRAKKLPRPTLAQVWQDTLFTVSKKLLLLRDITDLVNELRKLSFSVVRFQRVNLLLLNP
LYNQNTLYTHDDATNKVQGSQNILFAEGPGGLAWQQQTPLQTDHRRMQREFSAVCDLTPY
QALHSGCHFPLGHDNHWSGCIEFIKTDDSEFDEQAVTFLGLLADVVAIAVDNIAEINRAF
SEREKLRFERDHYRILVDVTNTVISKLELDVLAAEVSKEIHRFFNIDYISLALCGTHKDK
NKLNVFSTRYQSGKAVQYQQAWVDITGTLAGQVLQSKTLLLVNLADISLLAPDDKQLANM
LDEGLQVVCLLPLFFGHKMLGVLKLAQCQSDIFTDSNVKLLRQIAARIAIAVDNALAYNE
ITRLKDSLVNENLYLTDQIIHNGEFGEIIGNSAGIKAVLEQVEMVASSDCTVLILGETGT
GKELIARAIHNLSTRKNKRMVKMNCAAIPSGLMESDLFGHEKGAYTGASSQRIGRFEMAD
GGTLFLDEVGDIPLELQPKLLRVLQEREIERLGGSKIIPVDVRLIAATNRDLKLMMVNRE
YRSDLYYRLNVFPIVIPPLRERPEDIPLLVKFFTQKIAKRMNRTIDTIPGETLRLLSRLP
WPGNIRELENVIERAVILSRGTTLNLQLQELEYHLSPLEATKPVAERVVHKTLLPESEEP
ESSESERARIVRVLRETNGVVAGPKGAAIKLGLKRTTLLSRMQRLGISVKSIEDEDGMD
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggatagagcaaaaaaactaccccgtcccacattggctcaagtttggcaagatacactg
ttcacggtatcaaaaaagttattattgctacgggatataaccgatttagttaatgaactc
agaaagctctctttttctgtggtgcgttttcagcgggtcaatttattactgcttaaccct
ctttataaccaaaataccctttatacccatgacgatgcgaccaacaaggtgcagggatcg
caaaatatcttgtttgccgaaggccccggtggcttagcctggcagcagcagacgcctttg
cagactgaccatcgccgtatgcaaagggagttttctgctgtttgtgatttgacaccttat
caggcattgcactccggctgccatttccccttgggtcatgacaatcactggtcaggctgt
atcgaatttattaaaactgatgacagtgagtttgatgaacaagcagttacttttctggga
ttactggcagatgtagtagcaatcgccgttgataatattgctgaaatcaatcgggcattt
tccgagcgtgaaaaactgcgctttgagcgcgaccactaccgaattttagtagatgtgacc
aatacggttatttctaagctggagttggatgtattagcggcagaagtctcaaaagagata
catcgattttttaatattgattacattagcttagcgctctgtggtacccataaggataaa
aataagttaaatgtattttctacccgctaccagagtggcaaggccgtacagtatcagcag
gcatgggtggatattaccggcactttggctgggcaggttttacagagtaaaacgttattg
ctggttaatttggctgatatctctcttttggcaccggacgataagcaactggcaaatatg
ctggatgaagggttacaagttgtttgcctgttgccgctttttttcggccacaaaatgtta
ggtgttttgaaactggcacaatgtcagagtgatatcttcactgatagcaatgtaaaactg
ttgcgtcaaattgcggcgcgtattgccattgctgttgataacgctctggcctacaacgaa
attacccgcctaaaagattcgttggtaaatgaaaatctctatctaacggatcaaattatt
cataatggagagtttggcgagataatcggtaatagtgcagggattaaagcggtactggaa
caagttgagatggtggcctccagtgattgtaccgtattgattctgggggaaaccggcacc
ggtaaggagctgattgcccgggctattcataatttgagtacccgcaagaataaacgcatg
gtgaaaatgaactgtgcagccattccatcgggtttgatggaaagtgatctgttcggtcat
gagaagggggcttataccggcgcatcatcacaacgtattggccggtttgaaatggctgac
ggcggcacactatttcttgatgaagtgggcgatattcctctggaactacagcctaaatta
ttgcgtgtattacaggagcgggaaatagaacgtcttggcggcagtaaaattattccggtg
gatgttcgcctgattgctgcgaccaatcgtgatttaaaattgatgatggtgaatcgcgaa
taccgcagcgacctctattatcggcttaatgtttttccgattgtgatccctccgctgcgt
gagcggccggaagatattccgttgttggtaaaattctttactcaaaaaatagccaaacgg
atgaatcgcactatcgacacaattcctggtgaaacattacgtttgctcagccgtttaccg
tggccgggcaatattcgtgaattggaaaatgttattgagcgggcggtcatccttagccgt
ggcactacgctgaatttgcagttacaagagttggaatatcatttgtcgccgctagaggct
actaaacctgtggccgaaagggttgtgcataaaaccttattacccgaaagtgaagagcct
gaatcttcagagtctgagcgcgcgcgaattgttcgggtattacgtgaaaccaatggcgtg
gttgcaggcccaaaaggggccgccattaagttagggctaaaacgcaccaccttgttatca
cggatgcagcggctaggaatatcagtcaaaagtatcgaagatgaagatgggatggattaa
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