Yersinia intermedia: CH53_3371
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Entry
CH53_3371 CDS
T03608
Name
(GenBank) helix-turn-helix domain protein
KO
K27259
AraC family transcriptional regulator, pdu and cob operon regulator
Organism
yin
Yersinia intermedia
Brite
KEGG Orthology (KO) [BR:
yin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
yin03000
]
CH53_3371
Transcription factors [BR:
yin03000
]
Prokaryotic type
Helix-turn-helix
AraC family
CH53_3371
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PocR
HTH_AraC
HTH_18
Motif
Other DBs
NCBI-ProteinID:
AJJ17744
UniProt:
A0A0T9LX98
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All DBs
Position
3768134..3769036
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AA seq
300 aa
AA seq
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MISASSLNSELINKIAQDFAQATGLAVVVVNIHGEEISDLFNFTPFCQLMRQDPVNHLRC
RMSDRCGGLEASKSNEPCIYRCHAGLTDFSIPLVIAGHLVGFVLCGQVRLHADVYLIDIL
NIDNHWQQNPALMDEFHNVPIMDFSRVIASADLLKLIVENCLKKHLNFVVINDNMGSKDP
GRVRPVHPHDSKMKKALRYIDTHLSEELRLEEVAGKVYLSPYYFSKLFKKYQGIGFNAWV
NQQRMANAREMLQHSDWSIASIAKNLGFSQTSYFCKVFRQTYNVTPQVFRSLSSERSEMK
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgatttctgccagttctcttaactcagagctcataaataaaatcgcccaggattttgcc
caagccaccgggttggcggtggtagtggtgaatattcacggtgaggaaatctctgacctg
tttaatttcactccattttgtcaattaatgcgtcaagatccggttaaccatctacgttgt
cggatgagtgatcgttgtggtggtcttgaagcatccaaatccaatgagccatgtatctac
cgctgtcatgctggattaacggatttttctattcctttggtgattgccggccatctggtg
ggttttgtgttatgtggtcaggtccggctgcatgcagatgtttaccttattgatattctg
aatatcgataaccactggcagcagaatccggcgctaatggatgagttccataatgtgccg
ataatggatttttcgcgggtaatagcctcggctgatttactgaagctgattgttgagaac
tgcctgaaaaaacacctcaattttgttgtgatcaatgacaatatggggagcaaagatcca
ggcagggtacggccggttcatccgcatgacagcaaaatgaagaaagcactacgctatata
gacacgcatttatcagaagagctacggttggaagaagtggctggcaaggtgtatctcagc
ccttactatttcagtaagttatttaaaaaatatcaggggatcggcttcaatgcctgggtc
aaccaacaacgtatggctaatgccagagagatgttgcagcacagtgattggagcattgcc
agcattgccaaaaatcttggtttttcccaaaccagctacttttgcaaggtgttccgccag
acctataatgtgacaccgcaggtatttcgttcactttcttctgaacgcagtgaaatgaaa
tga
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