Yersinia intermedia: CH53_339
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Entry
CH53_339 CDS
T03608
Symbol
gyrA
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
yin
Yersinia intermedia
Brite
KEGG Orthology (KO) [BR:
yin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
yin03032
]
CH53_339 (gyrA)
03400 DNA repair and recombination proteins [BR:
yin03400
]
CH53_339 (gyrA)
Enzymes [BR:
yin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CH53_339 (gyrA)
DNA replication proteins [BR:
yin03032
]
Prokaryotic type
DNA Topoisomerases
CH53_339 (gyrA)
DNA repair and recombination proteins [BR:
yin03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CH53_339 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AJJ17974
UniProt:
A0A208ZWE2
LinkDB
All DBs
Position
complement(400571..403243)
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AA seq
890 aa
AA seq
DB search
MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM
RYTEIRMSKIAHELLADLEKDTVDFVPNYDGTEQIPAVMPTRIPNLLVNGSSGIAVGMAT
NIPPHNLSEVIDGCLALIEDENITIEGLMEFIPGPDFPTAAIINGRRGIEEAYRTGRGKV
YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG
MRIVIEIKRDAVGEVVLNNLYSLTQLQVTFGINMVALSQGQPKLLNLKDILVAFVRHRRE
VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAATPAEAKAGLIANSWELGNV
ASMLERAGDDAARPEWLEAEYGIRDGRYFLTEQQAQAILDLRLQKLTGLEHEKLLDEYKE
LLTLIGELIFILENPDRLMEVIREELVAIKEQYNDARRTEITANTSDINIEDLINQEDVV
VTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRLY
WMKVYQLPEASRGARGRPIVNLLPLEPNERITAILPVREYEEGRHIFMATASGTVKKTAL
TEFSRPRSAGIIAVNLNEGDELIGVDLTDGSNEVMLFSALGKVVRFPESQVRSMGRTATG
VRGINLNGDDRVISLIIPRGDGEILTVTENGYGKRTAVEEYPTKSRATQGVISIKVSERN
GKVVGAVQVAPTDQIMMITDAGTLVRTRVSEVSVVGRNTQGVTLIRTAEDEHVVGLQRVA
EPEEDDEILDGESLDGEEGGEDNAALNTPEDDDAADEAEEGDAEDEDDNV
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccttgccagagaaataacaccggtcaacatcgaggaagagctgaaaagctcc
tatctggattatgcgatgtccgttattgtcggacgtgctttaccagatgtccgggatgga
ctgaaaccggtgcaccgtcgcgtactgtatgcgatgaatgtactgggtaatgactggaat
aaaccatacaaaaaatcggcccgtgtagtcggggacgttatcggtaaatatcacccgcat
ggtgacagcgcggtctacgacacaattgtgcgtatggcccagccgttctcactgcgctat
atgctggtggatgggcagggcaacttcggttccgtcgatggcgactccgctgcggcgatg
cgttataccgaaatccgtatgtctaaaattgctcacgaattgttagcggatttagaaaaa
gataccgttgacttcgtgcctaactatgatggtacggaacagatccccgcagtgatgcca
acccgaatccctaacctgttggttaacggttcgtctggtattgccgttgggatggcaacc
aatattccgccacataacctgtctgaggttattgatggctgtctggccctgatcgaagat
gaaaacatcaccattgaagggttgatggagttcatccctggcccagacttcccaacagcc
gccattattaatggtcgccgtggtattgaagaggcttatcgtactggccgtggcaaggtc
tatatccgtgcccgtgctgaagttgaagccgacgcgaaaactggccgtgaaaccattatc
gttcacgagatcccgtatcaggtgaacaaagcgcggttgattgagaaaatcgctgagctg
gtcaaagagaaacgcgtagaaggcatcagcgcgttacgtgatgagtctgataaagacggc
atgcgtatcgtgattgagattaaacgtgacgccgtcggggaagtggttctaaataacctc
tattcactgacgcaacttcaggtgactttcggtatcaatatggtggctctgtctcaaggg
cagcctaaattgcttaacctgaaagacatcctggttgcatttgtgcgccaccgccgtgaa
gtggttacccgtcgtaccatttttgaactgcgtaaagcacgtgaccgcgcgcacatcctt
gaagcattggcaattgcactggctaacatcgatccgattatcgaattgatccgccgtgcc
gccactcctgctgaagcaaaagcgggcttgattgccaactcatgggaattaggcaacgtt
gcgtcaatgttggaacgtgccggtgatgacgctgcccgccctgagtggctggaagctgaa
tacggtatccgtgacggcagatatttcctcaccgagcaacaagctcaggcaatcttggat
ctgcgtttgcagaaactgacgggcctggagcatgaaaaactgctggatgagtataaagag
ctgctgaccttaattggtgagttgatctttattctggaaaacccggatcgcctgatggag
gttatccgcgaagaattagtggctatcaaagagcaatataacgacgcacgtcgtactgag
ataacggctaatacttccgacatcaacatcgaagatctgattaatcaggaagatgtggtt
gtgacgctgtcccatcagggctacgtcaaatatcaaccgctgacggattacgaagctcag
cgccgtggtggtaaaggtaagtcagctgctcgtatcaaagaagaagacttcattgatcgt
ctgttggttgccaatacccatgatactattttgtgcttctccagccgtggccgtctctat
tggatgaaggtctatcagttgccggaagccagccgtggtgcgcgtggtcgtccgatcgtg
aacttattgccgcttgagccaaatgagcgtattaccgccattctgccagtgcgggaatat
gaagaaggtcgtcacatctttatggctaccgccagcggcaccgtgaagaaaaccgctttg
accgagttcagtcgtccacgcagtgccggtattattgccgtcaatctgaatgaaggcgat
gagctgattggtgtggatctgaccgatggcagcaatgaagtcatgctgttctccgcattg
ggtaaagtggttcgcttccctgagtcacaggtccgttcgatgggccgtactgcgaccggt
gtacgtggtatcaacctcaatggcgatgatcgggttatttctctgattatcccacgtggt
gatggcgaaatcttgactgtgactgaaaatggttatggtaagcgtaccgcagtggaagag
tacccaaccaagtctcgtgcgactcagggtgttatctccattaaagtcagtgagcgtaat
ggtaaggttgtgggggctgttcaggtggcacctaccgaccagatcatgatgatcaccgat
gcgggcacgttggtacgtactcgcgtatctgaagtgagtgtcgtggggcgtaatacccaa
ggtgtgacgctgatccgtaccgcagaagatgaacatgtcgtcggtctgcaacgtgttgct
gagccagaagaggatgatgaaatccttgatggcgaatcattagacggtgaagagggcggc
gaagataatgctgcactgaacacaccagaagatgacgatgctgctgatgaagcagaagaa
ggcgacgctgaagacgaggatgacaacgtataa
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