Yersinia intermedia: CH53_3453
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Entry
CH53_3453 CDS
T03608
Name
(GenBank) TRAP transporter, DctM subunit
KO
K11690
TRAP-type transport system large permease protein
Organism
yin
Yersinia intermedia
Pathway
yin02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
yin00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CH53_3453
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
yin02000
]
CH53_3453
Transporters [BR:
yin02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
CH53_3453
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DctM
Motif
Other DBs
NCBI-ProteinID:
AJJ21144
UniProt:
A0A0T9LXT8
LinkDB
All DBs
Position
complement(3862711..3864003)
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AA seq
430 aa
AA seq
DB search
MDAFILVFTLAILLAIGVPVAYAVGLSAIAGAFWIDLPLEAVMIQITSGVNKFSLLAIPF
FILAGAIMAEGGIARRLVSFAYIFVGFIRGGLSLVNIVASTFFGAISGSSVADTASIGSV
MIPEMDKKGYPRDFAAAVTASGSVQAILTPPSHNSVIYSLATGGTVSIAALFIAGILPGL
LLSFTLMLMCVGFAYKRGYPKGERVPFRQAFKIFVDTLWGLMTVVIIMGGILSGIFTATE
SAAIACLWSFFVTMFIYRDYKWSELPKLMYRTVKTVTIVMILIGFAASFGAIMTYMQLPE
RITEFFTSVSDNKYVILMCINIMLLLIGTLMDMAPLILILTPVLMPVTNSLGIDPVHFGM
IMLINLGIGLITPPVGSVLFVASAVSKQKIEQVVKAMLPFYGALLLVLMLVTYIPEISLW
LPRVFGVYTG
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggacgcatttattttagtttttactctggcaattttgctggctattggtgtcccggtg
gcttatgccgtcggtttaagtgccatcgccggtgcattttggattgatctgccgctggaa
gcggtaatgattcaaatcaccagtggtgtcaacaaattctccttactggccattccattc
tttattttggcgggagccattatggccgaaggtggcattgcacgccgcctggtgagcttc
gcttatattttcgttggtttcatccgtggtggtctttcgctggttaacattgttgcttca
acattcttcggcgctatttcaggatcatcagtggcagataccgcctctatcggctcggtg
atgatcccggaaatggataaaaaaggctatccgcgtgactttgccgccgcagtcaccgcc
agtggttcagtgcaggcaatattgaccccacccagccataattcggtgatttattcactg
gcaactggcggcaccgtctccatcgcagcactgtttattgccgggattttgcccggtttg
ctgctgagctttaccttgatgttaatgtgtgtcggttttgcctataaacggggttaccct
aaaggtgaacgggtgccattccgtcaggcgttcaaaatctttgtcgacaccctttggggg
ctgatgacggttgtcatcatcatggggggaattctttccgggatatttaccgccacagaa
tctgccgcgatagcctgtttgtggtcgttcttcgtcactatgtttatctatcgcgactat
aaatggtccgaattacctaagctgatgtaccgcacagtaaaaaccgtcactattgtgatg
attttgatcggttttgctgccagtttcggtgccatcatgacctacatgcagttgccagaa
cgtatcactgaatttttcacctcggtctctgataacaagtatgtgattctgatgtgtatc
aacatcatgctgctgctgattggcacgctgatggatatggcaccgttgattctgatccta
acgccggtactgatgccagtgaccaattcattaggtattgatccagtccatttcggtatg
attatgttgattaatctggggattggtctgatcacgccaccggttggttcggtactgttt
gtggccagtgcggtgagtaaacagaagattgaacaagtggtaaaagcgatgttgccgttc
tatggtgcattgctgctagtgctgatgttggtcacttatattcctgagatatcactgtgg
ctaccaagggtatttggtgtttacaccggctga
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