Yersinia intermedia: CH53_357
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Entry
CH53_357 CDS
T03608
Symbol
menD
Name
(GenBank) 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase
KO
K02551
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:
2.2.1.9
]
Organism
yin
Yersinia intermedia
Pathway
yin00130
Ubiquinone and other terpenoid-quinone biosynthesis
yin01100
Metabolic pathways
yin01110
Biosynthesis of secondary metabolites
yin01240
Biosynthesis of cofactors
Module
yin_M00116
Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol
Brite
KEGG Orthology (KO) [BR:
yin00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
CH53_357 (menD)
Enzymes [BR:
yin01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.9 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase
CH53_357 (menD)
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Motif
Pfam:
TPP_enzyme_M_2
TPP_enzyme_N
TPP_enzyme_C
ETF
Motif
Other DBs
NCBI-ProteinID:
AJJ20136
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Position
complement(426866..428539)
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AA seq
557 aa
AA seq
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MSTSVFNRRWAALLLEALTRHGVRHICIAPGSRSTPLTLAAAAHPSLVCHTHFDERGLGH
LALGLAKASTEPVAVIVTSGTAAANLYPALIEAGLTGERLVLLTADRPPELIDCGANQAI
RQQGLFASHPTLSLNLPRPTPDISASWLVSTLDNAMAQLQQGGLHINCPFAEPLYGGDEH
AYAEWSATLGDWWQECHPWLRQSLSVPQGQQADWFFWRQKRGVVIAGRMTAQEGQLLAEW
ADLLGWPLIGDVLSQTGQPLPCADLWLGHPTAKTILSQAQIVLQFGSSLTGKRLLQWQAG
CQPQEYWLVDNLPGRLDPANHRGRRIISPVNVWLEEHPAQRRTPWAGELTICSENAQAHV
AEALNEQFSEAAVAHQLAELLPDNGQLFVGNSLIVRLIDALGQLPAGYPVYSNRGASGID
GLLSTAAGVQRATAKPTLVIVGDLSALYDLNALALLRQSSAPTVLLVVNNNGGQIFSLLP
TPEADRQRFYCMPQDVSFEHAAAMFSLHYARPDSWLQLQHQVEQCWLQGGVTLIEIVVPP
SQGAETLQQLVQQVAQL
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacaagtgtttttaaccgtcgctgggcggcgttgttactggaagccttgacccgc
cacggtgtgcgtcatatctgtattgctcccggatcccgctcgactccgttaacactggcg
gcggcggcgcatccctcgttggtttgtcatacccattttgatgaacgcggtctgggccat
ttggcattaggcttggcgaaagcctccaccgagccagtggccgtcattgtcacttccggt
actgccgccgccaatctctatcctgctttgattgaagccgggctgaccggtgagcggctg
gtgttattgaccgctgatcgtccaccagaattgattgattgcggtgccaatcaggctatt
cgtcaacaagggctgtttgccagccaccctacactaagcctcaatctgccgcgtccgaca
cccgatatttctgccagttggctggtttccacactcgataatgcgatggcgcaattacag
cagggtggcttgcacattaactgcccgtttgccgaacctttgtatggtggtgatgagcac
gcctatgccgaatggtctgccaccttaggcgactggtggcaggagtgtcatccgtggctg
cgtcaatccttatctgtgccacaaggccagcaagcggactggtttttctggcgacaaaag
cgtggagtggtgattgccgggcgcatgacggcacaagaggggcagctactggctgaatgg
gctgatttgctcggttggccgctgataggtgatgtgttgtcacaaaccggtcagccgcta
ccttgcgctgacttatggctcgggcatcccaccgctaaaactattctctcgcaggcacag
attgtgctgcaatttggtagcagcctgaccggtaaacggctgttgcaatggcaggctggg
tgccaaccgcaagagtactggttggtcgataacttgcccggtcgcctcgatccggcgaat
catcgtggccgcagaatcatttcaccggtgaatgtatggctggaggaacatccagcacag
cgccgcacgccgtgggccggggaactgaccatctgctcggagaatgctcaagcccatgtg
gctgaagccttgaatgagcaatttagcgaagccgcagtcgcgcatcaactggcagaatta
ttaccggataatggtcagttgtttgtcggtaacagtttaattgtgcgcttgattgatgca
ttgggccaactgcctgccggttatccggtttacagtaaccgtggggccagtggcatcgat
ggtttattgtcaacggcagccggtgttcagcgcgcaacggctaaacccacgttggttatc
gtgggtgatttatcggccttatatgatcttaatgctctggcgttgttgcgccaaagctcg
gcacctacggtgttgctggtggtgaacaataatggcgggcagattttctcgctgttaccc
accccagaagccgatcgacagcgcttttactgcatgccgcaagatgtgagttttgaacat
gctgcggcgatgttcagtctgcattatgcccggccagatagctggctccagcttcagcac
caagtagagcaatgctggttacagggtggcgttacactgattgaaatcgtggtgccgcca
agtcagggggcagaaacactgcaacaactggtgcaacaggtggcgcaattatga
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