Yersinia intermedia: CH53_3584
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Entry
CH53_3584 CDS
T03608
Name
(GenBank) hhH-GPD superbase excision DNA repair family protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
yin
Yersinia intermedia
Pathway
yin03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
yin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CH53_3584
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yin03400
]
CH53_3584
Enzymes [BR:
yin01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
CH53_3584
DNA repair and recombination proteins [BR:
yin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CH53_3584
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AJJ20643
UniProt:
A0A0T9LT30
LinkDB
All DBs
Position
complement(3997759..3998364)
Genome browser
AA seq
201 aa
AA seq
DB search
MFYRYGETEINHLKRRDKKMAAAIERLGMITRPLSPDLFAALIRNIVDQQISVKAALTVN
ARLLTLLGAVTPITVAAASVEAIQGCGMTMKKAGYIKGAADAALNGSLDLSAISLLPDND
VIAQLSNLNGVGIWTAEMLLISSLARPDVVSWGDLAIRRGMMNLYGHKTLPRERFERYRR
RYTPYGTTASLYLWALSHETV
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgttctatcgttacggtgaaacagaaattaaccatctcaaacggcgcgataaaaagatg
gcggcagccatcgagcgattagggatgataactcgcccgctatcccctgatttatttgct
gcattgatcagaaatatcgtcgaccaacagatttcggtcaaggcggcactaacagtcaac
gcacggctgctcacattactgggcgccgtgacaccaataactgttgccgctgcctctgta
gaggcgattcaaggatgcggtatgacaatgaagaaagcgggatatattaaaggcgctgcg
gatgctgcacttaatggctcgctggatttatctgctatatccctgctgcccgataacgac
gttattgcgcagttatcaaacctcaacggtgtcggcatctggaccgcagagatgttattg
atctcctcacttgcccgacccgatgttgtcagttggggagatctagccatccggcgcggc
atgatgaatttatatggtcataaaacgctgccacgagaacgttttgaacgctaccgccgc
cgttacaccccctatggaacaaccgcatccctctatctatgggcactgtcacatgagacg
gtataa
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