Yersinia intermedia: CH53_360
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Entry
CH53_360 CDS
T03608
Symbol
edd
Name
(GenBank) phosphogluconate dehydratase
KO
K01690
phosphogluconate dehydratase [EC:
4.2.1.12
]
Organism
yin
Yersinia intermedia
Pathway
yin00030
Pentose phosphate pathway
yin01100
Metabolic pathways
yin01120
Microbial metabolism in diverse environments
yin01200
Carbon metabolism
Module
yin_M00008
Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate
Brite
KEGG Orthology (KO) [BR:
yin00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
CH53_360 (edd)
Enzymes [BR:
yin01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.12 phosphogluconate dehydratase
CH53_360 (edd)
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GFIT
Motif
Pfam:
ILVD_EDD_N
ILV_EDD_C
Motif
Other DBs
NCBI-ProteinID:
AJJ19417
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Position
complement(430762..432573)
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AA seq
603 aa
AA seq
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MNATLIRVTQRITARSVATRTAYLQRISAAKENTVRRSQLACGNLAHGFAACQPDDKIAL
KNMVRSDIAIITSYNDMLSAHQPYEYYPQQLKDALHAVGAVGQVAGGVPAMCDGVTQGQD
GMELSLMSRDVIAMSAAIGLSHNMFDGALYLGVCDKIVPGLLMAALSFGHLPAVFVPAGP
MASGLSNKEKVRVRQLFAEGKVDRQALLDAEAASYHSAGTCTFYGTANSNQMVMEVMGLH
LPGSSFIQPNTPLRDALTAAAARQITRLTETSGNYLPIGQLVDEKVVVNGIVALLATGGS
TNHTMHLVAMARAAGIIIDWDDFSELSEVIPQLCRIYPNGPADINYFQAAGGVALLVKEL
LQGGLLHEDVHTVAGFGLQRYTQEPYLEQGQLCWRDGVQQSLDDTVIASMAMPFSPHGGT
KVLSGNLGRAVMKTSAVPSDHQIIEGPAVVFESQHDVGPAFESGALDRDCVVVVRYQGPR
AIGMPELHKLMPPLGVLLDRGFKVALVTDGRLSGASGKVPSAIHVTPEAYCGGLLAKIRN
GDRVRVDGVTGELSLLVDAAELAARHTDLPDIAAFHVGSGRELFGALREQLSGAEQGACC
LRF
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgaccctcatccgagtcacgcaacgtattactgcgcgatccgtagctacccgt
actgcttatttgcaacgtatcagcgcggccaaagaaaatacagtgcgccgttcgcaactg
gcctgtggcaatttggcgcacggttttgcggcctgccagccagacgacaaaattgcgcta
aagaacatggtacgcagcgatatcgcgattattacctcctataacgacatgctatcggca
catcagccgtatgaatattatccgcaacaactgaaagatgccttgcatgcagtgggggcg
gtcgggcaggtggcgggaggcgttccggcgatgtgtgacggggtgacgcaaggccaggat
ggtatggaactgtcgctgatgagccgcgatgtaattgcgatgtctgcggcaattggcttg
tcacacaatatgtttgatggtgcactctatcttggcgtgtgcgacaaaattgtgcccggt
ttgttgatggcggcgttgtcattcggtcatttgccagcggtttttgttcctgccgggccg
atggcgagcggcctgtctaataaagaaaaagtgcgggtgcgccagttgtttgcggagggc
aaagtcgatagacaggctttgttggacgcagaggctgcctcctaccacagtgccggtacc
tgtactttttatggcaccgccaactccaaccagatggtgatggaggtgatggggttacat
ttgcccggttcctcctttatccagcctaatacgccgctacgtgatgcactcaccgccgcc
gccgcccgccagatcacccgcctgacagaaaccagcggtaactatttacccattggtcag
ttggtggatgaaaaggtggtggttaacggtattgtggcactactggcgactggcggctcg
actaatcacaccatgcatttagtggcgatggcgcgtgcggcggggatcatcatcgattgg
gatgatttttctgaattatcggaagtgataccacagttatgtcgcatttatcctaatggc
ccggcagatatcaattactttcaggcggccggtggcgtagcgctgttggtaaaagagctg
ttgcagggcggtttgctccatgaagatgtccataccgtggccggatttggcttgcagcgc
tatacccaagagccttatctggaacaggggcaattatgttggcgtgacggggtgcagcaa
tcgctggatgatactgttatcgccagtatggcgatgcctttctcaccacacggtggcacc
aaagtcttaagtggcaacttggggcgggcagtgatgaaaacctcggcggtgccaagtgat
catcagattattgaaggccccgccgtggtgtttgaaagccagcacgatgtcggccccgcg
tttgaatctggcgcactggaccgcgattgcgtggtggtggtgcgttatcaggggccgcga
gctattgggatgccagaattgcataaactgatgccaccattaggagtattactggaccgt
ggctttaaggtggcactggtcaccgatggccgtttgtccggcgcgtcaggcaaagtgccc
tcagccatccatgtgacacccgaagcgtattgtggcggtttgctggcgaaaatccgtaat
ggcgatcgggtgcgtgttgatggtgtcactggcgagctttcactgctggtggatgcggct
gaactggctgcccgccataccgacttgccagatatcgcggccttccacgtaggcagtggc
cgtgaattgtttggtgcattgcgcgaacaactttccggtgctgagcaaggggcttgttgt
ctccgtttttag
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